Pairwise Alignments

Query, 340 a.a., ribosomal large subunit pseudouridine synthase, RluD subfamily from Agrobacterium fabrum C58

Subject, 343 a.a., ribosomal large subunit pseudouridine synthase from Sinorhizobium meliloti 1021

 Score =  548 bits (1412), Expect = e-161
 Identities = 264/340 (77%), Positives = 293/340 (86%)

Query: 1   MNDPFKQGGDARKVLIAGEDAEGRIDVWLVGEVGSDLSRSRLKALIEQGAVLLNGQPVTE 60
           MNDPFKQ    RKVL AG+DA GR+D +L   +  + SR+R+K+LIEQGAV +NG  VTE
Sbjct: 1   MNDPFKQAPGNRKVLTAGDDAAGRLDAFLTEALAGEFSRNRIKSLIEQGAVSINGATVTE 60

Query: 61  PKKKVHPGDRVEIVMPEPEDPVPQGEDIPLDVEYEDEDLIVLVKPAGLVVHPGAGNWTGT 120
           PK+KVHPGD   I +PEPEDP P+GE IPLDV YED DLIVLVKPAGLVVHPGAGNWTGT
Sbjct: 61  PKRKVHPGDSFRIALPEPEDPEPKGEAIPLDVLYEDADLIVLVKPAGLVVHPGAGNWTGT 120

Query: 121 LVNALIYHCGDSLSGIGGVKRPGIVHRLDKETSGVMVVAKNDNAHRHLAAQFADHGRTGP 180
           LVNALI+HCGDSLSGIGGVKRPGIVHRLDK+TSGVMVVAKND AHRHL+ QFADHGR GP
Sbjct: 121 LVNALIHHCGDSLSGIGGVKRPGIVHRLDKDTSGVMVVAKNDAAHRHLSDQFADHGRNGP 180

Query: 181 LERAYKAVVWGRPRTLRGTVDAALGRGTDRTKRAVKNEDSFDAREAITHYEVMERFHEKP 240
           LERAY+AVVWGRPR L+G +DA LGR  DRTKRAVK EDS DAREAITHYEV+ER+HEKP
Sbjct: 181 LERAYRAVVWGRPRQLKGKIDAPLGRAGDRTKRAVKREDSDDAREAITHYEVVERYHEKP 240

Query: 241 DASCLASMVECRLETGRTHQIRVHMAHIGHPLIGDPEYGAAFRTKANLLDEPARSTVNRF 300
           D + LAS VEC LETGRTHQIRVHMAHIGHPLIGDP+YGAAFRTKANLL EPAR+ VNRF
Sbjct: 241 DGTSLASTVECHLETGRTHQIRVHMAHIGHPLIGDPDYGAAFRTKANLLPEPARAAVNRF 300

Query: 301 PRQALHAYLLAFEHPRTGEVMEFETDMPEDMEELVTALRS 340
           PRQALHA++L FEHP TGE M FET +P DM+EL+ ALR+
Sbjct: 301 PRQALHAFMLQFEHPATGETMHFETPVPADMQELIAALRA 340