Pairwise Alignments

Query, 340 a.a., ribosomal large subunit pseudouridine synthase, RluD subfamily from Agrobacterium fabrum C58

Subject, 375 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

 Score =  237 bits (604), Expect = 4e-67
 Identities = 148/323 (45%), Positives = 193/323 (59%), Gaps = 33/323 (10%)

Query: 20  DAEGRIDVWLVGEVGSDLSRSRLKALIEQGAVLLNGQPVTEPKKKVHPGDRVEIVMPEPE 79
           DA GR    ++ E+    SR+RL+  I +G V LNGQPV EPK K+  G+ + +   + E
Sbjct: 31  DAGGRRLDQVLAELLPQYSRNRLQTWIREGRVSLNGQPVQEPKHKLLGGEFLNLEEVQDE 90

Query: 80  DPVPQG-EDIPLDVEYEDEDLIVLVKPAGLVVHPGAGNWTGTLVNALIYHCGDSLSGIGG 138
               +  EDIP  V YEDE ++++ KPAGLVVHPG+GNW+GTL+NAL++H       +  
Sbjct: 91  KLAAETPEDIPFPVVYEDEAILIINKPAGLVVHPGSGNWSGTLLNALLHHTPQ----LAQ 146

Query: 139 VKRPGIVHRLDKETSGVMVVAKNDNAHRHLAAQFADHGRTGPLERAYKAVVWGRPRTLRG 198
           V R GIVHRLDK+TSG+MVVAK   A   L  Q     RT  ++R Y+A++ G      G
Sbjct: 147 VPRAGIVHRLDKDTSGLMVVAKTLEAQTDLVRQL--QART--VKREYRALLVGY-LNRNG 201

Query: 199 TVDAALGR-GTDRTKRAVKNEDSFDAREAITHYEVMERFHEKPDASCLASMVECRLETGR 257
           TVDA +GR  T RTK AV      + REA THY V+E F          ++V+CRLETGR
Sbjct: 202 TVDAPIGRHPTQRTKMAVVQH---NGREARTHYTVLEHFER-------CTLVQCRLETGR 251

Query: 258 THQIRVHMAHIGHPLIGDPEYGAAFRTKANLLDEPARSTVNRFPRQALHAYLLAFEHPRT 317
           THQIRVHMA +G PL+GD  Y               ++   RFPRQALHAY L   HP T
Sbjct: 252 THQIRVHMAALGFPLVGDAVY------------NKGKTAGVRFPRQALHAYRLGLIHPLT 299

Query: 318 GEVMEFETDMPEDMEELVTALRS 340
            E M+++  +P+DM  L+  LRS
Sbjct: 300 REPMQWDAPVPDDMAALLKTLRS 322