Pairwise Alignments

Query, 340 a.a., ribosomal large subunit pseudouridine synthase, RluD subfamily from Agrobacterium fabrum C58

Subject, 308 a.a., Conserved hypothetical protein member of yabO/yceC/yfiI family from Mycobacterium tuberculosis H37Rv

 Score =  165 bits (417), Expect = 2e-45
 Identities = 117/323 (36%), Positives = 167/323 (51%), Gaps = 40/323 (12%)

Query: 24  RIDVWLVGEVGSDLSRSRLKALIEQGAVLLNGQPVTEPKKKVHPGDRVEIVMPEPEDPVP 83
           R+D  L   +G  LSR+   AL E+GAV LNG P  +  + V  G  +++ +PE   P+ 
Sbjct: 16  RVDTGLARLLG--LSRTAAAALAEEGAVELNGVPAGKSDRLVS-GALLQVRLPEAPAPL- 71

Query: 84  QGEDIPLDVE-----YEDEDLIVLVKPAGLVVHPGAGNWTGTLVNALIYHCGDSLSGIGG 138
             ++ P+D+E     Y D+D++ + KPA +  H   G WTG  V   +   G  ++  G 
Sbjct: 72  --QNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVG-WTGPTVLGGLAAAGYRITTSGV 128

Query: 139 VKRPGIVHRLDKETSGVMVVAKNDNAHRHLAAQFADHGRTGPLERAYKAVVWGRPRTLRG 198
            +R GIVHRLD  TSGVMVVA ++ A+  L   F    +   +++ Y A+V G P    G
Sbjct: 129 HERQGIVHRLDVGTSGVMVVAISERAYTVLKRAF----KYRTVDKRYHALVQGHPDPSSG 184

Query: 199 TVDAALGR--GTDRTKRAVKNEDSFDAREAITHYEVMERFHEKPDASCLASMVECRLETG 256
           T+DA +GR  G +      KN      R ++THY+ +E F         AS+++  LETG
Sbjct: 185 TIDAPIGRHRGHEWKFAITKN-----GRHSLTHYDTLEAF-------VAASLLDVHLETG 232

Query: 257 RTHQIRVHMAHIGHPLIGDPEYGAAFRTKANLLDEPARSTVNRFPRQALHAYLLAFEHPR 316
           RTHQIRVH A + HP  GD  YGA          +P  +      RQ LHA  LAF HP 
Sbjct: 233 RTHQIRVHFAALHHPCCGDLVYGA----------DPKLAKRLGLDRQWLHARSLAFAHPA 282

Query: 317 TGEVMEFETDMPEDMEELVTALR 339
            G  +E  +  P D++  +  LR
Sbjct: 283 DGRRVEIVSPYPADLQHALKILR 305