Pairwise Alignments

Query, 232 a.a., RNA methylase from Agrobacterium fabrum C58

Subject, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 5/172 (2%)

Query: 57  HRGILAL---GRRVRDDGLEQMTAALPASSLVLVGCGISNHDNLGAMFRNAAAFYADAVL 113
           H+G++A     R++ ++ L+ + A      L+LV  G+++  NLGA  RNA A    AV+
Sbjct: 68  HQGLIARVKPARQLNENDLDDILAQ-HEQPLLLVLDGVTDPHNLGACLRNADAAGVAAVI 126

Query: 114 LDETCCDPLYRKALRVSVGSVLSVPYHRGGGAVEMLERLSEEGFAIWGLSPDGKTEIRDI 173
           + +    PL     +V+ G+  +VP  R       +  L E+G    G + +   +I   
Sbjct: 127 VPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHDIYQS 186

Query: 174 PRSERMALVIGTEGEGLPQSVLSRF-QTARIAQSPQVDSLNAGTASGLALYQ 224
             +  +A+V+G EG+G+ +          +I  +  V SLN   A G+ L++
Sbjct: 187 KLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFE 238