Pairwise Alignments

Query, 300 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 301 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  261 bits (666), Expect = 2e-74
 Identities = 135/303 (44%), Positives = 204/303 (67%), Gaps = 5/303 (1%)

Query: 1   MEYFIQQLINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFL-IATS 59
           ME F QQL NGL +G IY LIA+GYTMVYG++ +INFAHGD+F +G +    +F     S
Sbjct: 1   MEEFFQQLTNGLAVGGIYALIALGYTMVYGVLKLINFAHGDLFTIGAYLGFTLFTAFGLS 60

Query: 60  FFAGIPVALLLLLMMIVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFI 119
            F   P  +LL+L+M++ ++   L  +++ERVAYRPLR S RL+ +++A+G SI   N +
Sbjct: 61  GFVSGPGGVLLVLVMVMGLV--ALIGFLLERVAYRPLRSSSRLSAVVSALGASIFFQNAV 118

Query: 120 QVTQGPRNKPIPSMVTESYHFG--AITVSLKQLIIMVVTSVLLFAFWYIVNKTPLGRAQR 177
            +  G + +  P+ +  SY      I V L +++++  +  L+ A ++   +T +G A R
Sbjct: 119 MLIYGAKFQVYPNDIRPSYVLSIMGIDVPLVRIMMIAASLGLMLALYWFTQRTRIGAAIR 178

Query: 178 ATEQDRKMAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASFSDGFVPGVKAFTA 237
           AT  D+  A L+G+DV++ IS+ F++G AL  VAG M  +YYG   F+ G+V G+KAFTA
Sbjct: 179 ATAIDQGAAKLMGIDVNRVISLVFMIGPALGGVAGVMVGLYYGQVDFTMGWVYGLKAFTA 238

Query: 238 AVLGGIGSLPGAVLGGLLIGLIESLWSAYFSIAYKDVAAFGILAFVLIFKPTGILGRPEV 297
           A+LGGIG++PGA++GGLL+G+IE+L +AY SIA+KD  AF +L  +LI +PTG+LG    
Sbjct: 239 AILGGIGNIPGAMVGGLLLGVIEALGAAYISIAWKDAIAFLVLILILIIRPTGLLGERVA 298

Query: 298 EKV 300
           +K+
Sbjct: 299 DKI 301