Pairwise Alignments

Query, 300 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Pantoea sp. MT58

 Score =  310 bits (793), Expect = 3e-89
 Identities = 160/304 (52%), Positives = 220/304 (72%), Gaps = 8/304 (2%)

Query: 3   YFIQQLINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSFFA 62
           YFIQQ++NG+TLGS Y LIAIGYTMVYGIIGMINFAHG+++M+G + + IV  IA     
Sbjct: 7   YFIQQMLNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIV--IAALMMM 64

Query: 63  GIPVALLLLLM-MIVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQV 121
           GI    L++    ++A+L++  + W IERVAY+P+R S RL  LI+AIGMSI L N++ +
Sbjct: 65  GIDTGWLMIAAGFVMAILISSAYGWSIERVAYKPVRSSKRLIALISAIGMSIFLQNYVSL 124

Query: 122 TQGPRNKPIPSMVTESYHFG-----AITVSLKQLIIMVVTSVLLFAFWYIVNKTPLGRAQ 176
           TQG R+  +PS++T  +  G     A T+S  Q++I VVT + + A    +  + +GRA 
Sbjct: 125 TQGSRDLALPSLITGQWTVGESNGFAATISTMQVVIWVVTFLAMLALTTFIRYSRMGRAC 184

Query: 177 RATEQDRKMAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASFSDGFVPGVKAFT 236
           RA  +D KMA+LLG++ D+ IS+TF++GAA+AAVAG +   +YG  +   GF+ G+KAFT
Sbjct: 185 RACAEDLKMASLLGINTDRVISLTFVIGAAMAAVAGVLLGQFYGSINPFIGFMAGMKAFT 244

Query: 237 AAVLGGIGSLPGAVLGGLLIGLIESLWSAYFSIAYKDVAAFGILAFVLIFKPTGILGRPE 296
           AAVLGGIGS+PGA++GGL++G+ E+L SAY S  YKDV +F +L  VL+  PTGILGRPE
Sbjct: 245 AAVLGGIGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSFALLIVVLLVMPTGILGRPE 304

Query: 297 VEKV 300
           VEKV
Sbjct: 305 VEKV 308