Pairwise Alignments

Query, 300 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 316 a.a., branched-chain amino acid ABC transporter permease from Klebsiella michiganensis M5al

 Score =  234 bits (597), Expect = 2e-66
 Identities = 133/310 (42%), Positives = 191/310 (61%), Gaps = 18/310 (5%)

Query: 1   MEYFIQQLINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSF 60
           M+  IQQ+ING+ LGSIY LIA+GYTMVYGI+ +INFAHGDI M+G    L       + 
Sbjct: 1   MDTLIQQIINGVMLGSIYALIALGYTMVYGILRIINFAHGDILMVGALTTLSGMHALNAH 60

Query: 61  FAGIPVALLLLLMMIVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQ 120
           F  +P    L L +++AM +  L    +ER AYR LR + RLAPLI+ IG+S+ L     
Sbjct: 61  FPTLPPLAQLGLALLLAMTVCALLAMAVERFAYRRLRNAPRLAPLISGIGVSVLLQTVAM 120

Query: 121 VTQG------PRNKPI-PSMVTE--SYHFGAITVSLKQLIIMVVTSVLLFAFWYIVNKTP 171
           +         P+  P+ P  VT   + H  A+ +++  ++ + +   ++   W +V  T 
Sbjct: 121 IVWSRNPLMFPQILPMDPIAVTHGSAAHPPAL-ITVTGIVTVALALTVMLGLWLLVEYTR 179

Query: 172 LGRAQRATEQDRKMAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASFSDGFVPG 231
           LGR  RA  ++ ++A L+GV+ +  I++TF +G   AA+AG M    YG A FS GF+PG
Sbjct: 180 LGRGMRAVAENPRIATLMGVNPNAIIALTFAIGGVFAALAGVMMASNYGSAGFSMGFLPG 239

Query: 232 VKAFTAAVLGGIGSLPGAVLGGLLIGLIESLWSAY--------FSIAYKDVAAFGILAFV 283
           +KAFTAAVLGGIG++ GA++GGLL+GLIESL + Y        F   Y+D+ AF +L  V
Sbjct: 240 IKAFTAAVLGGIGNIRGAMIGGLLLGLIESLGAGYLGDLTHGVFGSNYQDIFAFMVLILV 299

Query: 284 LIFKPTGILG 293
           L+F+P G+LG
Sbjct: 300 LVFRPAGLLG 309