Pairwise Alignments

Query, 300 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 308 a.a., branched-chain amino acid transporter permease subunit LivH from Herbaspirillum seropedicae SmR1

 Score =  307 bits (787), Expect = 2e-88
 Identities = 155/300 (51%), Positives = 216/300 (72%), Gaps = 6/300 (2%)

Query: 6   QQLINGLTLGSIYGLIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLIATSFFAGIP 65
           QQL+NGL+LG+IY LIAIGYTMVYGIIGMINFAHG+I+M+  +  L+  L A    +G P
Sbjct: 10  QQLVNGLSLGAIYALIAIGYTMVYGIIGMINFAHGEIYMIASYVGLVT-LTAIGVQSGYP 68

Query: 66  VALLLLLMMIVAMLMTGLWNWVIERVAYRPLRGSFRLAPLITAIGMSIALSNFIQVTQGP 125
           + LLL   +IV++L+TGL+ W +ERVAYRPLRG  RL PLI+AIGMSI L N++Q+ QG 
Sbjct: 69  LPLLLGGALIVSVLVTGLYGWTVERVAYRPLRGGPRLVPLISAIGMSIFLQNYVQIGQGA 128

Query: 126 RNKPIPSMVTESYHFG-----AITVSLKQLIIMVVTSVLLFAFWYIVNKTPLGRAQRATE 180
           R+  +P +++ +  F       +T+   +++I+ VT VL+ A    + ++ +GRA RA  
Sbjct: 129 RDMSVPVLISGALEFQMGSDFTVTIPYSRMVIVGVTLVLMVALTLFIARSRMGRACRACA 188

Query: 181 QDRKMAALLGVDVDKTISITFIMGAALAAVAGTMYLMYYGVASFSDGFVPGVKAFTAAVL 240
           +D  MA LLG+D +K IS TF++GA LAAV G +  +  G  +   GF+ G+KAFTAAVL
Sbjct: 189 EDMGMANLLGIDTNKVISFTFVLGAMLAAVGGVLIALTIGKLNPYIGFIAGIKAFTAAVL 248

Query: 241 GGIGSLPGAVLGGLLIGLIESLWSAYFSIAYKDVAAFGILAFVLIFKPTGILGRPEVEKV 300
           GGIGS+PGA+LGG+L+GL E+  + Y    YKDV +FG+L  +L+F+PTG+LG+P+VEKV
Sbjct: 249 GGIGSIPGAMLGGVLLGLAETFAAGYLPSEYKDVVSFGLLVLILLFRPTGLLGKPDVEKV 308