Pairwise Alignments

Query, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 586 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score =  210 bits (534), Expect = 7e-59
 Identities = 121/260 (46%), Positives = 161/260 (61%), Gaps = 7/260 (2%)

Query: 18  GDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGM 77
           G+ IL VE    +FGGL+A+N+ SF  K GEI  LIGPNGAGK+T FN +TG    + G 
Sbjct: 331 GEVILDVEAARKQFGGLVAVNNVSFSVKAGEIVGLIGPNGAGKSTTFNLVTGVLSVSSGK 390

Query: 78  ITMRQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGY 137
           +  R Q+     L  L   +I+ +  +ARTFQ++RL  G++VLEN  +        A   
Sbjct: 391 LLYRGQS-----LAGLSSRDISSRG-IARTFQHVRLVPGMSVLENAAMGAFRRGQFAPQR 444

Query: 138 TILGLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGP 197
            IL  L L A +   A  + +A+  LE+  L D  D PAG L  G QR LEIARA+C  P
Sbjct: 445 GILASL-LRANRSEEARILSEARRQLERVGLGDLVDRPAGSLALGQQRILEIARALCCDP 503

Query: 198 ELLCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSVVMQISDHVVVLEYGQKI 257
            LL LDEPAAGL  KE  AL  LL  +R EG ++LL+EHDM  VMQ++DH+VV+E+G KI
Sbjct: 504 ALLLLDEPAAGLRLKEKEALAALLDKLRGEGMAVLLVEHDMDFVMQLTDHIVVMEFGAKI 563

Query: 258 SDGSPDHVKNDPKVIAAYLG 277
           ++G+P  ++  P V+ AYLG
Sbjct: 564 AEGTPAQIQVHPAVLEAYLG 583