Pairwise Alignments

Query, 1131 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 1331 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  202 bits (515), Expect = 1e-55
 Identities = 126/406 (31%), Positives = 217/406 (53%), Gaps = 22/406 (5%)

Query: 649  LLKEIAAHKKTDAALQDAKETAEAANRAKSRYVVGLSHELRTPLNAVLGYAQILERDETI 708
            +L ++   K+ +  L+ AKE A+A ++AK  ++  +SHE+RTP+NA+LG A  L  +  +
Sbjct: 579  ILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAH-LALNTPL 637

Query: 709  PAPRQSAIKVIRRSADHLSGLIDGLLDISKIEAGRLQVYSNEINIKDFLDQVVDMFRPQA 768
               ++  +  I  SA +L G+I+ +LD SK+EAG+L V   + N+ D LD V  +   +A
Sbjct: 638  DTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKA 697

Query: 769  QAKGLEFRHERTAALPQYVRTDEKRLRQILVNLLSNAIKFTDEGSVTFDVAY-----RSQ 823
            Q KG+EF  +    +P  +  D  RL Q++VNL  NA+KFT +G +           +  
Sbjct: 698  QEKGIEFLMDIDPHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVSQLNEQQV 757

Query: 824  VASFTVSDTGRGIAEKDLARIYEPFQRGEAESVRPMPGLGLGLTITRLLTNTLGGEISVS 883
               F V DTG GIA+  L  +++ F + +    R   G GLGL+I++ L   +GG+I+V 
Sbjct: 758  TLRFAVKDTGIGIAQDKLDDLFDAFSQADNSITRQYGGTGLGLSISKQLVELMGGQITVH 817

Query: 884  SEKDNGSTFRVRLMLSAVHRPSTAPAPEKTIRSYSGP-----RRTIVVVDDNEDHRELMR 938
            SE+  GSTF   ++             +  +R  S P      + ++VVDDN+  R ++ 
Sbjct: 818  SEEGKGSTFEFSVVCG---------LQDAKMRDISQPVHGLADKRVLVVDDNDSARHILD 868

Query: 939  QVLSPLDFVVLTAQSGPECLTLIEGVKPDLFLIDISMPGMTGWQLVTKLREAGQTAPL-- 996
             +L+ + F V+T  +G E L+ I+    D+  +D +MPGM G +L+T+++  G    +  
Sbjct: 869  SLLTAMRFNVVTVSNGFEALSEIQQKPFDMLFVDWNMPGMNGIELLTRVKTLGLRGHMKS 928

Query: 997  IMLSANIGDGAVAGAGDDNHNDAIAKPVDIRHLCDRLAVHLGLKWI 1042
             +++A   +  + G      +  I KPV+  +L D +    G++ +
Sbjct: 929  FLVTAYGREINLDGENSKLVDALIVKPVNPSNLLDAIVTSYGIEHV 974



 Score = 46.6 bits (109), Expect = 1e-08
 Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 6/159 (3%)

Query: 903  RPSTAPAPEKTIRSYSGPRRTIVVVDDNEDHRELMRQVLSPLDFVVLTAQSGPECLTLIE 962
            R  T  A   +  +++G  +++++V+DNE ++E+   +L      V+ A  G E L  +E
Sbjct: 975  RHKTNEAHHNSRPNFAG--QSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLE 1032

Query: 963  GVKPDLFLIDISMPGMTGWQLVTKLR--EAGQTAPLIMLSANIGDGAVAGAGDDNHNDAI 1020
                DL L+D+ MP M G      +R      + P++ ++AN     +        ND +
Sbjct: 1033 HADFDLVLMDMQMPVMDGITATEHIRANPRWHSLPIVAMTANAMAIDIERCLQAGMNDHL 1092

Query: 1021 AKPVDIRHLCDRLAVHLGL--KWIYETDLPSAPVTQPPA 1057
            +KP+++      L   L +  +  + +  P+ P    PA
Sbjct: 1093 SKPIEVDKFYQVLRHFLQVSDEQSFSSHSPNKPSASKPA 1131