Pairwise Alignments

Query, 1131 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 977 a.a., periplasmic sensor hybrid histidine kinase from Synechococcus elongatus PCC 7942

 Score =  205 bits (522), Expect = 1e-56
 Identities = 135/403 (33%), Positives = 220/403 (54%), Gaps = 36/403 (8%)

Query: 654  AAHKKTDAALQDAKETAEAANRAKSRYVVGLSHELRTPLNAVLGYAQIL--------ERD 705
            AA ++T+  L+ A+E AEAAN+AKS ++  +SHELRTPLNA++GY++++        E +
Sbjct: 455  AALRETNDRLEQAREQAEAANQAKSAFLANMSHELRTPLNAIIGYSEMMMEEAEDGIEVE 514

Query: 706  ETIPAPRQSAIKVIRRSADHLSGLIDGLLDISKIEAGRLQVYSNEINIKDFLDQVVDMFR 765
            E +P  R+     I  +  HL  LI+ +LD+SKIEAGR+++Y    ++ + ++ V  + +
Sbjct: 515  ELLPDFRK-----INNAGKHLLELINSILDLSKIEAGRMELYLESFSLPELINGVKSIIK 569

Query: 766  PQAQAKGLEFRHERTAALPQYVRTDEKRLRQILVNLLSNAIKFTDEGSVTFDVAYRSQVA 825
            P  +    +   +  A +   +  D  +LRQ L+NLLSNA KFT +G++   VA +    
Sbjct: 570  PLIEKNQNQLLVDCPADIG-LMTADVTKLRQTLLNLLSNASKFTHQGTIQLQVAAQGDQV 628

Query: 826  SFTVSDTGRGIAEKDLARIYEPFQRGEAESVRPMPGLGLGLTITRLLTNTLGGEISVSSE 885
             F V D+G G++ + + RI+E F + +  + R   G GLGL+I+R     +GG+I+V S 
Sbjct: 629  VFKVVDSGIGMSPEQIDRIFEAFAQADDSTTRKFGGTGLGLSISRHFIEMMGGKITVESV 688

Query: 886  KDNGSTFRVRLMLSAVHRPSTAPAPEKTIRSYSGPRRT---------IVVVDDNEDHREL 936
               GSTF + L    V  P + PA +  +   +    T         ++VVDD    REL
Sbjct: 689  LGEGSTFTITLP-RQVQPPQSIPAVDPVLTDEAIATATEQEDQNQPVVLVVDDEPSAREL 747

Query: 937  MRQVLSPLDFVVLTAQSGPECLTLIEGVKPDLFLIDISMPGMTGWQLVTKLREAGQTA-- 994
            +R++L    + V+TA  G E L   + ++P L  +D+ MP + GW ++T L+     A  
Sbjct: 748  LRRMLEKEGYRVVTAAGGAEGLQRAQELRPALITLDLMMPQVDGWSVLTALKADPMLAEI 807

Query: 995  PLIMLSANIGDGA--VAGAGDDNHNDAIAKPVD---IRHLCDR 1032
            P++M+S   G       GA D  H     KP+D   +R + +R
Sbjct: 808  PVVMVSMVEGRSLSYALGAADYLH-----KPIDRDQLRRILER 845



 Score = 56.2 bits (134), Expect = 1e-11
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 6/107 (5%)

Query: 901  VHRPSTAPAPEKTIRSYSGPRRT--IVVVDDNEDHRELMRQVLSPLDFVVLTAQSGPECL 958
            +H+P       + +  Y+ P R    +V++D+  +R L+RQ+L    + V  A  G + L
Sbjct: 830  LHKPIDRDQLRRILERYTHPDRQPLALVIEDDPVNRSLLRQLLERDGWQVAEANQGQQGL 889

Query: 959  TLIEGVK--PDLFLIDISMPGMTGWQLVTKLREAG--QTAPLIMLSA 1001
             ++E ++  PDL L+D+ MP M G+  V  LR  G  QT P+I+++A
Sbjct: 890  AVLESLEQPPDLILLDLMMPQMDGFAFVDALRANGNWQTLPVIVVTA 936