Pairwise Alignments

Query, 1106 a.a., Acr family transporter from Agrobacterium fabrum C58

Subject, 1036 a.a., multidrug resistance protein from Vibrio cholerae E7946 ATCC 55056

 Score =  389 bits (998), Expect = e-112
 Identities = 294/1078 (27%), Positives = 512/1078 (47%), Gaps = 69/1078 (6%)

Query: 1    MNFSAWSIRNPIAPLLGFALLMILGMQAFNTLPITRFPNIDVPVVAVTVTQSGASPSELE 60
            M F+   I+ P+  +    L+++LG+QA   + +  +P +   V+ V+    GAS   ++
Sbjct: 1    MRFTDVFIKRPVLAVSISFLIVLLGLQAIFKMQVREYPEMTNTVITVSTGYYGASADLIQ 60

Query: 61   MQVTKEIEDAVAAISGVDEIQSTVVDGQSTTTVVFRIEKPTEEAVQDTKDAIDKIRSDLP 120
              +T+ +E AVA    +D + S  V G+ST TV  ++      A+ D     + +RS LP
Sbjct: 61   GFITQPLEQAVAQADNIDFMTSQSVLGRSTITVTMKLNTDPNAALSDVLAKTNSVRSQLP 120

Query: 121  ADIEVPVVSKIDVEGQAIQTFAVSSPNMTLEELSWFVDDTIKRSLQGQSGIGKVDRYGGA 180
             + E P V+       A+     +S  +   +++ +++  +   L   +G+  +D YGG 
Sbjct: 121  KEAEDPTVTMSTGSTTAVLYIGFTSNELASSQITDYLERVVNPQLYAVNGVSSIDLYGGM 180

Query: 181  DREVRVSLSPEKLDAYGITATEVNSQLRGTNVDLGSGRGQVGGNEQTIRTLGDTR--DVS 238
               +RV L P K+ A  ++A +V S L   N    S  GQ  G         DT+   V 
Sbjct: 181  KYALRVWLDPAKMAALNLSAADVMSILNANNYQ--SATGQAIGEFVLYNGSADTQVSTVE 238

Query: 239  QLANTTIALSNGRFVKLSELGTVTDTYQEQKSFSRFNGNPAVTFAVFRSKGASEVSVAET 298
             L +  +    G   +L ++  VT         +  NG  AV  A+  +  A+ +++A+ 
Sbjct: 239  DLESLVVKAEKGTVTRLGDIAKVTLAKSHDTYRASANGREAVVAAINAAPSANPINIAKD 298

Query: 299  VAASLDQVRKNNP-DVSIQMVDDAVYFTYGNYKAALDTLIEGAILAVIVVLLFLRNWRAT 357
            V   L +++KN P ++ + ++ D+      +    + T++E A++ ++V+ LFL + RA 
Sbjct: 299  VLEMLPELQKNMPSNIEMNVLYDSTVAINESIHEVIKTIVEAALIVLVVITLFLGSLRAV 358

Query: 358  LIAAVALPLSAIPTFWIMDIMGFSLNLVSFLALTLATGILVDDAIVEIENIARHIKMGKT 417
            LI  V +PLS I    +M +MGFS NL++ LA+ LA G++VDDAIV +EN+ RHIK G++
Sbjct: 359  LIPIVTIPLSLIGVAMVMQMMGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKEGES 418

Query: 418  PYRAALEAADEIGLAVIATSFTIIAVFVPVSFMPGIPGQYFIQFGLTVAFSVFFSLAVAR 477
            P+RAA+    EI + VIA + T+ AV+ P++ M GI G  F +F LT+A SVF S  VA 
Sbjct: 419  PFRAAIIGTREIAIPVIAMTLTLGAVYAPIALMGGITGSLFKEFALTLAGSVFVSGIVAL 478

Query: 478  LITPLMAAYLMRAEDA-----MDDHHDNDGRLMKAYTRMVTATTRKWWARYLTLVGAIAF 532
             ++P+M + +++A +A     +  HH  D R+   Y RM+TA        +  +V A AF
Sbjct: 479  TLSPMMCSKMLKANEAPNKFELKVHHLLD-RMTARYERMLTAV-----MAHRPVVIAFAF 532

Query: 533  LV-ASV-MLLAQVPGSFLPPDDASRVTLSVELPPNATLDETDRTTTQIYHALRDINGVES 590
            +V AS+ ML   +P    P +D   + L    P NA LD    T   +   L D   V+ 
Sbjct: 533  IVFASLPMLFKFIPSELAPSEDKGVIMLMGTGPSNANLDYLANTMDDVNKILSDQPEVQF 592

Query: 591  VFILGGASPKGDLELRRATVNVLLQHIDHSLLKLVVNKGLGSIPLIGQYLPKVEEKGRTR 650
              +  G                              N+  G    I   +P  +   R  
Sbjct: 593  AQVFTGVPNS--------------------------NQAFG----IASMVPWSQ---REA 619

Query: 651  PQWDVERDIFAQVRGIPDVRIIKLN----DRAERELSFNFL----SKNEKDLSDAVGILE 702
             Q  V   +   V+ IP + +          A   L   F+    S  E   + A  +L 
Sbjct: 620  SQATVTNRVGTLVQDIPGMAVTAFQMPELPGAGSGLPIQFVITTPSNFESLFTIATDVL- 678

Query: 703  SRLRASPILANVSSEGALPRPELQIRPRKDEIARLGITPQQISQTVRVATIGDIDAQLTK 762
            + ++A+P+      +       ++I   KD+    G+T Q I  T+        D  + +
Sbjct: 679  TEVKANPMFVYSDLDLNFDSATMKINIDKDKAGAYGVTMQDIGITLSTMM---ADGYVNR 735

Query: 763  ISLDDRQIPIRVQASLDTRRDLATIRALKIKTASGSLVPLYSVADIDYSEGPSSIKRNDR 822
            I L+ R   +  Q     R +  ++ +  ++ A G ++PL S+  ID    P S+   ++
Sbjct: 736  IDLNGRSYEVIPQVERKWRLNPESMNSYYVRAADGKVIPLGSLVTIDVVAEPRSLPHFNQ 795

Query: 823  NRVVSIGSDVPFGTALDTSTAEFKRIVAETKLPASVRLAESGDAKVQGEMQQGFVNAMLL 882
                ++G+    GTA+  +   F+ + A +KLP        G+A+              L
Sbjct: 796  LNSATVGAVPAPGTAMGDAINWFENL-ASSKLPKGYSHDYMGEARQYVTEGSALYATFGL 854

Query: 883  GLMLVLVVLILLFKDVIQPFTILFSLPLAIGGVAVALIITQNALSMPVLIGILMLMGIVT 942
             L ++ +VL + F+ +  P  I+ S+PLAI G  +AL      +++   +G++ L+G++T
Sbjct: 855  ALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALAWGTATMNIYSQVGLITLVGLIT 914

Query: 943  KNAILLVDFAIEMRRHG-MERVHAMVEAGRKRARPIIMTSIAMSAGMLPSALGVGEGGSF 1001
            K+ IL+ + A E + H  + R+ A++ A + R RPI+MT+ AM AG++P     G G + 
Sbjct: 915  KHGILICEVAKEEQLHNKLSRIEAVMHAAKVRLRPILMTTAAMIAGLIPLMYATGAGAAQ 974

Query: 1002 RAPMAIAVIGGIIVSTVLSLIVVPAFFLIMDDVSRLLAHLFGRFVGKKEVEEEALSNE 1059
            R  + I ++ G+ + T+ +L V+P  +  + +  + L      FV  K++E+ A  +E
Sbjct: 975  RFSIGIVIVSGLAIGTLFTLFVLPVIYSYLAEKHKPLP----VFVEDKDLEKLARIDE 1028