Pairwise Alignments

Query, 397 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 337 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  105 bits (263), Expect = 1e-27
 Identities = 97/372 (26%), Positives = 167/372 (44%), Gaps = 51/372 (13%)

Query: 24  AAAEGEAQAPVKQQNLPSIIVAHAAKRDLVDRIIATGTIRPVDEIYVQPLVDGLSIDTLN 83
           AAA G        + +P  IV    + D  + + A+G + P     V   V    ++  N
Sbjct: 14  AAAVGAVAFWYATRAVPVSIVT-PKRGDAAEIVYASGVVEPRVWAKVTSTVRERIVEQCN 72

Query: 84  VDIGDRVEANAILAVLSSDSLILQKSQLEANKAKAQAAVAQAKAQVLEAEASANDANRQR 143
            + G+RVE  A+LA            +L+  +A+A  +  QA+  +            Q 
Sbjct: 73  CE-GERVEKGAVLA------------RLDDTEARAILSELQARLSLA-----------QE 108

Query: 144 DRAAKLGQSGSGSVSQVEQTQAQAEVAAAKLNAARQAVSAGEADIKVVDAQIADIDLKLT 203
           +   KL  +   ++S+                   Q V     D+  ++A IA  + +L 
Sbjct: 109 EYRRKLALAERNTISE-------------------QTVDRARTDVAQLEALIAGQEARLA 149

Query: 204 RTGVKTPVAGIVSAKNAKVGAIASGAGNPLFTVIKDGAIELVADLSETDIQKVKIGQKAY 263
              ++ P  G V  ++ ++G +A   G  LF V +   + + A+++E DI +V++GQ AY
Sbjct: 150 AYVLRAPSDGRVLRQDGEIGEVAE-PGTVLFWVGEPRPLIVEAEVNEEDIPRVEVGQNAY 208

Query: 264 LTVAGGAEK-IEGKVRLVSPTVDPTTRLGSVHVVLPENSPARSGMYASAAIIVE-ETNAL 321
           L      E+ +E  V  ++P  DP T+   V + LPE++P R GM     ++V    NAL
Sbjct: 209 LRSDAFPERALEAVVDSITPKGDPVTKTYRVRLRLPEDTPLRIGMSTDVNVVVRLSRNAL 268

Query: 322 ALPLSAVTSGREGSTTRKVEGDVVKQVKIETGIEDSGFIEIVSGLAAGDKVVEKAGAFVR 381
            +P +AV+    G+    VEG   K  +IETGI  +  +E++SGL    +++        
Sbjct: 269 VIPAAAVS----GTRVAVVEGGTAKLREIETGIRGTDGVEVLSGLEETARIISPLSPDFA 324

Query: 382 DGDRINPVEAQT 393
           DG R++ V+  T
Sbjct: 325 DGTRVDVVQTAT 336