Pairwise Alignments

Query, 264 a.a., ABC transporter, nucleotide binding/ATPase protein (nitrate) from Agrobacterium fabrum C58

Subject, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  196 bits (497), Expect = 5e-55
 Identities = 110/251 (43%), Positives = 152/251 (60%), Gaps = 5/251 (1%)

Query: 8   SVVSARKLGLTFETGDGPVHALSDVDLDVKKGDFVSFIGPSGCGKTTFLRVIADLEKHTS 67
           SV+  + L   F  G   + A+ +VDL V   +FVS +GPSGCGK+T LR+IA LE  +S
Sbjct: 2   SVLELKNLIKKFGNGKKDLVAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSS 61

Query: 68  GEITVNGTTPENARKDRSYGYVFQAAALYPWRSIEKNIALPLEIMGYSKAEQRERIDRTM 127
           G I ++    E    D   G VFQ   L PW+++ +N+   LEI    K ++ E   + +
Sbjct: 62  GGIYLD--EKEVLGPDADRGMVFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIEIAKKFI 119

Query: 128 DLVNLTGFGKKYPWQLSGGMQQRASIARALAFDADLLLMDEPFGALDEIVRDHLNEQLLK 187
            +V L  F   YP++LSGGMQQR +IAR LA +  ++LMDEPFGALD   R  L + LLK
Sbjct: 120 KMVGLEEFCDSYPYELSGGMQQRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQDHLLK 179

Query: 188 LWDTTGKTICFVTHSIPEAVYLSTRIVVMSPRPGRVTDVIESTLPRERPLEIRETPEFLA 247
           +W T  KT+ FVTHS+ EAVYLS R+VVM+ RPG++  +I+  L R R    R +PEF  
Sbjct: 180 IWQTEKKTVVFVTHSVDEAVYLSDRVVVMTARPGKIKSIIDIDLDRPRK---RTSPEFTK 236

Query: 248 IAHRVREGLKA 258
               + + LK+
Sbjct: 237 YKKMIIDELKS 247