Pairwise Alignments

Query, 464 a.a., succinoglycan biosynthesis transport protein from Agrobacterium fabrum C58

Subject, 737 a.a., chain-length determining protein from Vibrio cholerae E7946 ATCC 55056

 Score = 72.0 bits (175), Expect = 6e-17
 Identities = 84/433 (19%), Positives = 177/433 (40%), Gaps = 36/433 (8%)

Query: 27  IVLAIVLCVGGALTYASMTPPRYKAYTDIVVNPSNLNVVN-DGVFSPNQQRDTQILEVES 85
           I+L  V+     L +       Y A   I++  +    V+ + V+  + +     L   +
Sbjct: 28  ILLFSVMVTAITLLFVLSMRSEYTARATILIESTQAKAVSIEEVYGLDTKSQEYYL---T 84

Query: 86  KLRTITSRNVLARVVDELKLDQDPEF-------VSPPPLARLKAMFS-----------SK 127
           ++  + S  +   V++ L L  DPEF        SP    RL                + 
Sbjct: 85  QIEILKSDTIAQEVIERLDLASDPEFDLSPESDASPSLKERLVEWMPFLQGFKQEETVAD 144

Query: 128 PDDGDNRVGALRSLGDRVTAERDP--RSFVVTLSVWTNDAEKSVAVSKAIVKAFESELFQ 185
           PD    R   L     +   E  P  ++ +V +     D + +  ++  I + +     +
Sbjct: 145 PDLEAYRQNRLILYKFKRGMEISPIRKTQLVNIYYTAGDPKLAAKIANEIARVYMDSHLE 204

Query: 186 TNSDSSQRVVDDLKKRLEEMRENVTIAEKRVADFRRENGLQENNGQLVSNLASGELN--- 242
              +   +    L  R+EE+R  +  +E ++  F +  GL +  G  V  LA+ EL    
Sbjct: 205 AKLEVELKANTWLNTRMEELRTQLRESEAKLQAFLQAEGLVDVQG--VEGLATQELEELT 262

Query: 243 AQVLATQQRLIQEESRLKQMEAAIAQNRTQSDA------IFDSQTMNTIRAQYSTLQQQI 296
           +Q+   + R +  E+ L Q+  + ++N +   A      I +  T+  ++      ++++
Sbjct: 263 SQMNKARDRRVAAET-LYQVANSYSKNDSDLTALSSIPEISNHPTIRDLKVAEVDAERKV 321

Query: 297 GAMTLTYGARHPRLATAGAERAMLERGMADEARRILQAAKINVAEARSSLDALRLKAVAE 356
              +  YG +HP+L +A A+   + + +  E R++L      +  A+ S  +L+ +    
Sbjct: 322 SEFSKRYGPKHPKLKSASAQLEAVRKNLRAELRQLLNGINNELQAAKQSERSLQTEFNQR 381

Query: 357 RANVFTDNDAQVRLRDLDRDARSAAAIYETYLTRSRQLAEQQSIDSTNVRVISQPVAPNS 416
           ++   T      +  +L R+ ++   +++ +L R ++ +     ++T  R   Q  AP +
Sbjct: 382 KSEFQTLTVKNAKYSELKREVQTNRELFDLFLARQKETSASGDFNTTIARFTDQASAPLT 441

Query: 417 RSWPPGKLTFLIA 429
            S P  KL  L+A
Sbjct: 442 PSKPNKKLIVLLA 454