Pairwise Alignments

Query, 256 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  185 bits (470), Expect = 7e-52
 Identities = 101/249 (40%), Positives = 143/249 (57%), Gaps = 1/249 (0%)

Query: 7   LLAGTAFAVSAFTASADVRFGIMNESYPPFFAKDASGKWQGWEIDLMDAVCAEMKEKCSI 66
           L+A T   V+       VRFGI   +YPPF   +A G  +G+++D+ +A+CAEM+ +C I
Sbjct: 12  LIATTISGVTQAKEWKTVRFGIEG-AYPPFSWTEADGSLKGFDVDMANALCAEMQVECKI 70

Query: 67  VELSWDGLIPALQTKKFDVIWSSMSNTQEREKVIDFTNKYYNTPSKLIGAKGEKPGAAPE 126
           V   WDG+IP+L  +K+D I ++MS T+ER+K +DFT KY   P+K I  KG       E
Sbjct: 71  VPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGADLAFTKE 130

Query: 127 DVKGKTIGIQVATIQSEYYKKYFAAVADEKTYQTLDEAFQDLAAGRIDYVFGDSLVLDAF 186
            +KG  IG+Q AT   +Y    +    D   Y + DEA+ DLA GRI  V GD+  L+  
Sbjct: 131 GLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVLGDASALEEG 190

Query: 187 VKSDAGKDCCADMGNVADDKEIMGLGVSGGLRKDDTELKNKLNAAIAAVRASGKYDEITK 246
           + +  G D    +G    D +  G G+   +RK D EL  KL+AAI A+R  G Y +I  
Sbjct: 191 MLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALREKGIYQQIQA 250

Query: 247 KYFSFDIYG 255
           KYF +D+YG
Sbjct: 251 KYFKYDVYG 259