Pairwise Alignments

Query, 240 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 229 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  130 bits (327), Expect = 2e-35
 Identities = 71/215 (33%), Positives = 128/215 (59%), Gaps = 4/215 (1%)

Query: 17  GWGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGLLLNLYTTAIRAVPELI 76
           G+  +L++ +  TL I+  + L+G+++ L  A G+++  + +     L  T IR +PEL+
Sbjct: 5   GYSLSLVQASWMTLQIALASLLVGLLLALVFAGGEMAKLKLIKWPTTLLVTVIRGLPELL 64

Query: 77  LIVGLYYAGTDGLNRLLQLMGLPPLEVNGFVAAVAVLGFVQGAYMTEVLRGAILAVPNGQ 136
           +++ +Y+  T    ++L  +    +E++ F++ V  L  +  +Y ++ LRGA+ AV  GQ
Sbjct: 65  VVLFIYFGST----QVLFFITGEFIEISPFISGVIALSLIFASYASQTLRGALKAVGRGQ 120

Query: 137 IEAARAFGMSPFLRFRRVVLPALLPNALPGLANLWLAVTKDSALVAVVGYQELALATRLA 196
            EAA A G+ P   F R+VLP  + +ALPGL N WL + KD+ALV+++G  +L    +L 
Sbjct: 121 REAASALGIPPSHAFIRIVLPQAVRHALPGLMNQWLVLLKDTALVSLIGVTDLLKQAQLT 180

Query: 197 GASTKQYFLFFLAAAFLYLAITLVSNLVFSQLERR 231
            A+T + F ++  AA +YL ITL++  V   ++ +
Sbjct: 181 SAATHEAFTWYATAAVVYLVITLITQRVVKVIDNK 215