Pairwise Alignments

Query, 240 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 246 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  161 bits (408), Expect = 1e-44
 Identities = 86/235 (36%), Positives = 141/235 (60%), Gaps = 20/235 (8%)

Query: 17  GWGGTLLKGAASTLAISAGAYLIGIVIGLAGALGKLSGNRPLGLLLNLYTTAIRAVPELI 76
           G+  ++LKGA  T+ ++  + L+ +++G+ GAL K++  R    +  LYTT IR +P+L+
Sbjct: 6   GYEASILKGALLTIEVAVLSLLLAMLLGMLGALAKMAPYRWARAIATLYTTIIRGIPDLV 65

Query: 77  LIVGLYYAGTDGLNRLLQLMG-------------------LPP-LEVNGFVAAVAVLGFV 116
           L++ +++ G   LN  L                       LP  ++++ FVA V  +GF+
Sbjct: 66  LMMLIFFGGQILLNNGLSWFNEFINQWLTARDPNHEWVAYLPDYVDISPFVAGVLTIGFI 125

Query: 117 QGAYMTEVLRGAILAVPNGQIEAARAFGMSPFLRFRRVVLPALLPNALPGLANLWLAVTK 176
            GAYM E  RGAILAV  G++EAA+A+GMS  + FRR++LP ++ +A+PG  N WL + K
Sbjct: 126 FGAYMAETFRGAILAVDKGELEAAKAYGMSAAMSFRRILLPQMIRHAIPGFGNNWLVLLK 185

Query: 177 DSALVAVVGYQELALATRLAGASTKQYFLFFLAAAFLYLAITLVSNLVFSQLERR 231
            +ALV+++G +++   + LA  STK  F F++A A ++L  T VS  +   LER+
Sbjct: 186 TTALVSIIGLEDMVRISSLAAGSTKMPFTFYMAVAIIFLFFTSVSTGLLKLLERK 240