Pairwise Alignments

Query, 649 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

Subject, 678 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  234 bits (597), Expect = 1e-65
 Identities = 140/345 (40%), Positives = 210/345 (60%), Gaps = 6/345 (1%)

Query: 306 LSKLSDGDVSYRIDQPFTATLDGVRNDFNMSAEKLQSALTRVAQNAGGIGAGANEIKSAA 365
           +S++++GD++  + + +      + +  N S   L++ + ++  ++  +   + EI    
Sbjct: 339 MSRVAEGDLNTSMSEEYQGEFGRLASAVNASIVNLRNMVDKITVSSARVATASTEIADGN 398

Query: 366 DDLAKRTEQQAAAVEETAAALEEITTTVRDSTKRAQEAGQIVSRAKAGAEQSGEVVRRAV 425
           +DL++R E QA+ +EETAA++EEIT TVR +   A++A  + + A   A + GEVV  A+
Sbjct: 399 NDLSQRVEAQASNLEETAASMEEITATVRQNADNAKDANLLATDAAKKAARGGEVVGEAI 458

Query: 426 IAMEQISKSANEISNIIGVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQ 485
            AM  I+ ++ +I++II VIDEIAFQTNLLALNA VEAARAGE G+GFAVVA EVR LAQ
Sbjct: 459 SAMGAINTASKKIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLAQ 518

Query: 486 RSASAAKEIKALITTSNDQVQQGVQLVGDTGKALATIVSEVQEINRHVVSIVESAQEQSS 545
           RSA AAKEIK LI  S D+V +G +LV ++G  L  IV  V  ++  +  I  S+ EQS+
Sbjct: 519 RSAGAAKEIKGLINDSVDKVNEGSRLVNESGSTLKEIVEAVVRVSDLIAQIAASSVEQST 578

Query: 546 GLQQINTAVNQMDQDTQKNAAMVEETNAASHSLAKEVASLNQLLSQFRLAEGAYQQKSQP 605
           G+ +IN A+  MD+ TQ+NA++VEET+AAS SL  E   L  L++ F         + +P
Sbjct: 579 GIDEINRAIAAMDEMTQQNASLVEETSAASQSLKDEGKELLNLMNFFVTENNVTTFERKP 638

Query: 606 APVRSAAGSDRSVASPVRALGRKLASAFSGNAALDTSKGD-WQEF 649
              +S     + V S  +A   +        AA    +GD W+EF
Sbjct: 639 R--QSTPPKTKPVVSMHKAPINQAVHKMPARAA---EEGDEWEEF 678