Pairwise Alignments

Query, 304 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 305 a.a., putative HTH-type transcriptional regulator pcaQ from Phaeobacter inhibens DSM 17395

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 83/298 (27%), Positives = 129/298 (43%), Gaps = 21/298 (7%)

Query: 1   MSHLRMLVMIEEHGQVSAAAAAMNMTQPAASRMLSEMEAIVKSPLCQRASRGVVLTKFGE 60
           + HL + V +     V+ AA  + MTQPA +R L E+EA+ + PL ++  RG+ L+ +GE
Sbjct: 9   LRHLEVFVEVARKMSVTQAAERLGMTQPAVTRALRELEAVCEKPLVEKHGRGIRLSAYGE 68

Query: 61  ALARRARTILLELREASRELNQMKSGSGGSVYIGAVTAPAISLVVPAIRRAMDTYPGIEI 120
                A   L   R+    L  + +  G  V IGA+   + ++V  A+    +       
Sbjct: 69  MFRDYAGRSLALTRDGVEMLRGLDAAEGSKVTIGALPTVSATVVPEALASIWEQGGRNRF 128

Query: 121 NVQVESSNVLARELLAARHDFIIGRIPD-------DFDPGLFSIHEIGIERACLVVREGH 173
           +V    +  L   L     D ++GR+P        DFDP LF       ER  +VV   H
Sbjct: 129 SVMSGDNQYLLDLLRRGELDVVVGRLPAPENMVGLDFDP-LFR------ERVTVVVAPDH 181

Query: 174 PLMRGEPVTLQD--LSGYDWVFQPPGALLRRTMEDVFLTHGVAMPRNVINTPSVVLTLAL 231
           PL R +   L D     Y  +  PP +++R ++E +FL  G+ MP   I T S       
Sbjct: 182 PLTRLDAAQLPDALFGKYPVLMPPPASIIRSSVERMFLEQGIPMPDAAIETVSSTFGRQF 241

Query: 232 VCNTNAIAPIAQDMAEFVAGQQADIGRTRILPTDFELVVKPYSI-ITTKGRVLPPSAR 288
                AI  I+      V       G    LP D +    P  + + ++ R+ P +AR
Sbjct: 242 TLAHQAIWVISHG----VVRSDLASGVLVALPLDTDSTRGPVGLCLRSEHRLSPAAAR 295