Pairwise Alignments

Query, 354 a.a., sugar binding protein from Agrobacterium fabrum C58

Subject, 341 a.a., glucose transporter, periplasmic substrate-binding component (from data) from Phaeobacter inhibens DSM 17395

 Score =  144 bits (363), Expect = 3e-39
 Identities = 105/350 (30%), Positives = 174/350 (49%), Gaps = 27/350 (7%)

Query: 7   LMAACAIGAASFAAPAFAQDKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKTDLQYAD 66
           L    A+  A+ A+ AFA+D  +VG++       RW  D   I   L+  G       A 
Sbjct: 4   LSGVSALAFAATASMAFAEDV-TVGVSWSNFQEERWKTDEAAIKAALEAKGATYVSADAQ 62

Query: 67  DDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLIRNSGDVSY 126
                QLS IE+++ +GV  L++ + D   +   ++ A ++GI V+AYDRLI +    ++
Sbjct: 63  SSSAKQLSDIESLIAQGVDALIVLAQDAQAIGPAVQAAADEGIPVVAYDRLIEDGR--AF 120

Query: 127 YATFDNFQVGVLQATSITDKLGLKDGKGPFNIELFGGSPDDNNAFFFYDGAMSVLKPYID 186
           Y TFDN +VG +QA ++       + +   N  +  GSP D NA F   G   +++  ID
Sbjct: 121 YLTFDNVEVGRMQARAVL------EAQPSGNYVMIKGSPTDPNADFLRGGQQEIIQAAID 174

Query: 187 SGKLVVKSGQMGMDKVGTLRWDPATAQARMDNLLSAYYTDAKVDAVLSPYDGLSIGIISS 246
           SG + +      + +  T  W PA AQ  M+ +L+A   D KVDAV++  DG + G++++
Sbjct: 175 SGDIKI------VGEAYTDGWLPANAQRNMEQILTA--NDNKVDAVVASNDGTAGGVVAA 226

Query: 247 LKGVGYGTKDQPLPVVSGQDAEVPSVKSIIAGEQYSTIFKDTRELAKVTVNMVNAVMEGK 306
           L   G          VSGQD +  ++  +  G Q  +++KD R+L K   N+   + EG 
Sbjct: 227 LTAQG-----MEGIAVSGQDGDHAALNRVAKGTQTVSVWKDARDLGKAAANIAVEMAEGA 281

Query: 307 ---EPEVNDTKTYENGVKVVPSYLLKPVAVTKENYKQVLVDGGYYKEDQL 353
              +       T   G ++   + L+P+ VT +N   V+VD G+  ++ L
Sbjct: 282 VMGDVAGGAAWTSPAGTELTARF-LEPIPVTADNL-SVVVDAGWITKEAL 329