Pairwise Alignments

Query, 512 a.a., ABC transporter, nucleotide binding/ATPase protein (sugar) from Agrobacterium fabrum C58

Subject, 512 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  337 bits (865), Expect = 5e-97
 Identities = 190/506 (37%), Positives = 310/506 (61%), Gaps = 21/506 (4%)

Query: 2   ANTILEMRNITKTFPGVKALENVNLKVKEGEIHALVGENGAGKSTLMKVLSGVYPAGTYE 61
           + T+LE+RN++K F  VKAL  V+ ++  GE+HAL GENGAGKSTLM V++GV      E
Sbjct: 3   SETVLEIRNVSKHFGAVKALTAVDFRLARGEVHALCGENGAGKSTLMNVIAGVLQPS--E 60

Query: 62  GEIHYEGAVRNFRAINDSEDIGIIIIHQELALVPLLSIAENIFLG-NEVASNGVISWQQT 120
           GE+  EGA     +   ++ +GI ++HQE+AL P  +IAEN+F+       + ++++ Q 
Sbjct: 61  GEVLIEGAPVKIASPAVAQSLGIALVHQEIALCPDATIAENMFMAATNRRRSALMNYAQL 120

Query: 121 FNRTRELLKKVGLKESPETLITDIGVGKQQLVEIAKALSKSVKLLILDEPTASLNESDSE 180
               + ++ ++   +  +  + D+ +  QQLVEIAKAL+   ++LI DEPTA+L E++++
Sbjct: 121 ERDAQAVMNRLAPIDVSQK-VGDLPISSQQLVEIAKALTLDCRVLIFDEPTAALTETEAQ 179

Query: 181 ALLNLLMEFRNQGMTSIIITHKLNEVRKVADQITVLRDGMTVKTLDCHQEEISEDVIIRN 240
            L  ++ + + +G++ I I+H++ EV  + D++TV RDG  V T      +++ D ++R 
Sbjct: 180 VLFGIIRDLKARGISIIYISHRMAEVFSLCDRVTVFRDGRYVATEMV--SDVTPDDVVRL 237

Query: 241 MVGRDLEDRYP---PRDVPIGETILEVKNWNAYHQQHRDRQVLHDINVTVRKGEVVGIAG 297
           MVGR++   YP   P    +GE IL V++           +   D++  +R GE++G+ G
Sbjct: 238 MVGREISQLYPDKQPSSERLGEPILSVRDLGG--------ERFRDVSFELRYGEILGVGG 289

Query: 298 LMGAGRTEFAMSVFGKSYGHRIT-GDVLIDGKPVDVSTVRKAIDAGLAYVTEDRKHLGLV 356
           L+G+GRTE A  +        +T G++ +  K + +     A  AG+ Y++EDRK  G+ 
Sbjct: 290 LIGSGRTEIAEGICAL---RPVTQGEIRLHDKVLRLRRYSDAAKAGVVYLSEDRKGSGVF 346

Query: 357 LNDNILHNTTLANLAGVSKASIIDDIKEMKVASDFRTRLRIRSSGIFQETVNLSGGNQQK 416
           L+ +I  N    +L  ++   +++  +E  +A D   RL +R  G+     +LSGGNQQK
Sbjct: 347 LDLSIAQNIAALDLKALTSLGLLNSREERALAEDLTRRLGVRMGGVDMPVSSLSGGNQQK 406

Query: 417 VVLSKWLFSNPDVLILDEPTRGIDVGAKYEIYTIINQLAADGKGVLMISSEMPELLGNCD 476
           V ++K L  +P V+++DEPTRGIDVGAK EI+ ++ +LA  G G+L+ISSE+PEL+G CD
Sbjct: 407 VAIAKQLAVDPKVILMDEPTRGIDVGAKSEIHRLLRELARAGIGILVISSELPELIGLCD 466

Query: 477 RIYVMNEGRIVAELPKGEASQESIMR 502
           R+ V+ EGRI  E+   E ++E IMR
Sbjct: 467 RVLVVREGRIAGEVSGNEMTEEVIMR 492



 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 11/247 (4%)

Query: 259 ETILEVKNWNAYHQQHRDRQVLHDINVTVRKGEVVGIAGLMGAGRTEFAMSVFGKSYGHR 318
           ET+LE++N + +    +    L  ++  + +GEV  + G  GAG++     + G      
Sbjct: 4   ETVLEIRNVSKHFGAVK---ALTAVDFRLARGEVHALCGENGAGKSTLMNVIAGVLQPSE 60

Query: 319 ITGDVLIDGKPVDVSTVRKAIDAGLAYVTEDRKHLGLVLNDNILHNTTLANLAGVSKASI 378
             G+VLI+G PV +++   A   G+A V ++   + L  +  I  N  +A  A   + S 
Sbjct: 61  --GEVLIEGAPVKIASPAVAQSLGIALVHQE---IALCPDATIAENMFMA--ATNRRRSA 113

Query: 379 IDDIKEMKVASDFRTRLRIRSSGIFQETVNLSGGNQQKVVLSKWLFSNPDVLILDEPTRG 438
           + +  +++  +      R+    + Q+  +L   +QQ V ++K L  +  VLI DEPT  
Sbjct: 114 LMNYAQLERDAQ-AVMNRLAPIDVSQKVGDLPISSQQLVEIAKALTLDCRVLIFDEPTAA 172

Query: 439 IDVGAKYEIYTIINQLAADGKGVLMISSEMPELLGNCDRIYVMNEGRIVAELPKGEASQE 498
           +       ++ II  L A G  ++ IS  M E+   CDR+ V  +GR VA     + + +
Sbjct: 173 LTETEAQVLFGIIRDLKARGISIIYISHRMAEVFSLCDRVTVFRDGRYVATEMVSDVTPD 232

Query: 499 SIMRAIM 505
            ++R ++
Sbjct: 233 DVVRLMV 239



 Score = 25.4 bits (54), Expect = 0.005
 Identities = 15/47 (31%), Positives = 24/47 (51%)

Query: 11  ITKTFPGVKALENVNLKVKEGEIHALVGENGAGKSTLMKVLSGVYPA 57
           I+   P +  L +  L V+EG I   V  N   +  +M++ SG+ PA
Sbjct: 454 ISSELPELIGLCDRVLVVREGRIAGEVSGNEMTEEVIMRLASGIGPA 500