Pairwise Alignments

Query, 398 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 330 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  130 bits (327), Expect = 6e-35
 Identities = 97/334 (29%), Positives = 161/334 (48%), Gaps = 37/334 (11%)

Query: 65  VIMALGMLLVIVAGHIDLSVGSIVAFVGAIAAILTVQWGMNPFLAALICLVIGGIIGAAQ 124
           +I++L +++   + H  L++G+  A + + +    V  GM       I L++GGI     
Sbjct: 31  IILSLSVIMSFASPHF-LTLGNFRAMLMSFSVEGIVVVGMT------ILLIVGGID---- 79

Query: 125 GYWIAYHRIPSFIVTLAGMLVFRGLTLFVLGGKNIGPFPTDFQVISTGFLPDIGGIEGLN 184
              ++   +  F + L+G L   G+             P    ++       IG I G  
Sbjct: 80  ---LSVGSVVCFSMVLSGSLFLMGVD------------PWTASLVGIAASAAIGCIMGFF 124

Query: 185 TTSMILTVLITVALFYLAWRRRVVNVKHGIDVEPFGFFIVQNLLISGAILFLGYQLSTYR 244
            T + L   IT     +  R   + +  G    P   F +          F      T+ 
Sbjct: 125 VTVVGLNHFITSLAAMVIVRGLCLVITKGT---PLSLFTLPPA-------FKAVGQGTFF 174

Query: 245 GLPNVLIVMLVLIALYSFVTRRTTIGRRVYAMGGNEKATKLSGINTERLSFLTFVNMGVL 304
           G+P V+++ + ++  + F+ RR T  R+V+  G NEKA   SGI T+ + F   V    L
Sbjct: 175 GVPYVILIFIAVVGAFDFLLRRATAFRKVFYTGSNEKAALYSGIKTKDVKFWVTVLCATL 234

Query: 305 AGLAGMIIATRLNSATPKAGVGFELDVIAACFIGGASASGGVGKITGAVIGAFIMGVMNN 364
           +G+AG I  +R  +ATP  GVG EL++IAA  IGGAS +GG G I GA++G  ++ V+ +
Sbjct: 235 SGVAGTIYMSRFGAATPTFGVGMELNIIAAAVIGGASLNGGSGTILGAILGIALLSVVTS 294

Query: 365 GMSIVGLGIDFQQMVKGLVLLAAVFFD-VYNKNK 397
            + ++ + + +Q M+KG +LLAAV  D + NK K
Sbjct: 295 SLILLDVSVYWQDMIKGCILLAAVSIDHLLNKRK 328