Pairwise Alignments

Query, 398 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 321 a.a., ribose ABC transporter permease from Klebsiella michiganensis M5al

 Score =  169 bits (427), Expect = 1e-46
 Identities = 116/373 (31%), Positives = 182/373 (48%), Gaps = 67/373 (17%)

Query: 19  YIRSNIREYGMLIALVAIMVFFQFYTGGILFRPVNLTNLILQNSFIVIMALGMLLVIVAG 78
           + ++ + E   LIAL+ ++      +    F   NL N++ Q S   IMA+GM LVI+  
Sbjct: 12  FTKAWLMEQKSLIALLVLIAIVSTMSPNF-FTVNNLFNILQQTSVNAIMAVGMTLVILTS 70

Query: 79  HIDLSVGSIVAFVGAIAAILTVQWGMNPFLAALICLVIGGIIGAAQGYWIAYHRIPSFIV 138
            IDLSVGS++A  GA+AA + V   +N  +A    L +G  IGA                
Sbjct: 71  GIDLSVGSLLALTGAVAASI-VGIEVNALVAVAAALALGAAIGAV--------------- 114

Query: 139 TLAGMLVFRGLTLFVLGGKNIGPFPTDFQVISTGFLPDIGGIEGLNTTSMILTVLITVAL 198
                                           TG +   G ++    T +++ +L  V +
Sbjct: 115 --------------------------------TGVIVAKGRVQAFIATLVMMLLLRGVTM 142

Query: 199 FYLAWRRRVVNVKHGIDVEPFGFFIVQNLLISGAILFLGYQLSTYRGLPNVLIVMLVLIA 258
            Y       VN     + + FG+F +   L                G+P  + +M ++  
Sbjct: 143 VYT--NGSPVNTGFTDNADLFGWFGIGRPL----------------GIPTPVWIMAIVFL 184

Query: 259 LYSFVTRRTTIGRRVYAMGGNEKATKLSGINTERLSFLTFVNMGVLAGLAGMIIATRLNS 318
              ++   T +GR +YA+GGNE AT+LSGI+  ++  + +   G+LA LAG+I   RL+S
Sbjct: 185 AAWYMLHHTRLGRYIYALGGNEAATRLSGISVNKVKIIVYSLCGMLASLAGIIEVARLSS 244

Query: 319 ATPKAGVGFELDVIAACFIGGASASGGVGKITGAVIGAFIMGVMNNGMSIVGLGIDFQQM 378
           A P AG G+ELD IAA  +GG S +GG G+I G +IGA I+G +NNG++++G+   +Q +
Sbjct: 245 AQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMI 304

Query: 379 VKGLVLLAAVFFD 391
           VK +V+L AV  D
Sbjct: 305 VKAVVILLAVLVD 317