Pairwise Alignments

Query, 298 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 53.5 bits (127), Expect = 6e-12
 Identities = 70/300 (23%), Positives = 134/300 (44%), Gaps = 32/300 (10%)

Query: 2   SLDRLAPAIFVFLWSTGWVTAKYAVYYTGPLTFLCLRYLLAG-LLLWAICRFSGISWPKQ 60
           SL  L   + V  W   +V+ K  + +  P+T   +R ++A  +L++ I  F+  S    
Sbjct: 5   SLGILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFFIRNFTKYS---- 60

Query: 61  RADVLRAILSGVFLHGIYLGMIWWAIGQGV-----PAAIGGIIAGLQPLMTAVAARFMIG 115
           + D +  +L+G      +LG+  + + + V      A    +IA   P+   + +  +  
Sbjct: 61  KEDFVYIVLAG------FLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEK 114

Query: 116 ERISPLQRAGLLLGFAGIAIAVL--PKVMATGALGMSVPLYAVAVNVLGMVSVTYGTLYQ 173
           +  S ++  G L+G  G+ I +L    V+    LG  +   AV   VL      Y  + Q
Sbjct: 115 KIPSKIKYFGSLIGLFGVFILILNGKFVLELNPLGDILMFGAVCTWVL------YTFVIQ 168

Query: 174 KKYVHGGNIMAVATLQYVGALLVTVPFAL--LLEDGHVDWSLGLAATLGWSV--GAISIG 229
           K   H  ++     +  +GA+   +PF +  L  +G  ++++ L   + +S+   AI   
Sbjct: 169 KLQKH-DDLKVTRDITLIGAVFF-IPFTIMELGYNGMFEFTILLNPYIAFSLLYLAIFCS 226

Query: 230 AVALLLY--LIRRGQVSRAASLIYLVPPLAAVEAAVLFGETLTPAMIAGTVLAVTGVYLA 287
           A+A L +   IR    S   + +Y++P +A +  A++         I G VL + GVY++
Sbjct: 227 AIAYLFWNMAIRLAGASTTTNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLVLFGVYIS 286