Pairwise Alignments

Query, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 297 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  116 bits (290), Expect = 7e-31
 Identities = 85/281 (30%), Positives = 135/281 (48%), Gaps = 6/281 (2%)

Query: 11  LLFLALLSTLWAASYTFIKIGVETIPPLTFIAARTLIAGLLLLVVIRLRGLRLPRDPATW 70
           LL L  L+ +W  S+ F++I   +  P   I AR   A L L +V +L    LP     W
Sbjct: 6   LLQLLCLAAIWGGSFLFMRIAAHSFGPAYLIEARVGFAALSLFLVAQLLRRSLPIRQH-W 64

Query: 71  RLFFVQACINSVLPFTLIAWAEQSIDAGLAVILNATTPIFTFLLTALVIRHETVSGRK-L 129
             F +   IN+ +PF L A+A  +++     ILN+T PI+  ++  L   H T   RK +
Sbjct: 65  PHFLILGLINTAVPFLLFAYAALTLNVSTLSILNSTAPIWGAVIGFLW--HGTPLSRKAV 122

Query: 130 FGTIAGMTGVCLIIGVEALGGAGEAIWSQLAVLTAAFSYACAAIFSKNFKGLDPVMPAAG 189
            G + G++GV +I+G + +     A    +    AA SY  A  ++K    L     A G
Sbjct: 123 AGLLLGVSGVAVIVGWDMVAIGHHAALPMVCAALAAASYGLATNYTKQAPQLSAFENAHG 182

Query: 190 SLICGAVLLLPVSLIVDRPWTLSPSAASLTALVCLSVFSTALAFMIYFRLMQTLGSVGTT 249
           S+    + + P+   V  P   +PS+    A++ L V  T LA++IYFRL++ +G+  T 
Sbjct: 183 SMWAACLWVAPLMWFV--PLRETPSSLEWGAVILLGVICTGLAYLIYFRLVKAIGAASTL 240

Query: 250 SQAYLRVPVGVAIGMVFLGEVPTSAMWVGLVCVIAGVLAMT 290
           S  +L    G+  G   L E        G + V+AG + +T
Sbjct: 241 SVTFLIPVFGILWGYWILDEPIGLNTLFGTLLVLAGTMLVT 281