Pairwise Alignments

Query, 302 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 289 a.a., integral membrane protein PecM from Phaeobacter inhibens DSM 17395

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 83/302 (27%), Positives = 140/302 (46%), Gaps = 25/302 (8%)

Query: 8   ARELLFLALLSTLWAASYTFIKIGVETIPPLTFIAARTLIAGLLLLVVIRLRGLRLPRDP 67
           +R+L+  AL   +W +SY      +    PL     R L AGLLL++++R    +LP  P
Sbjct: 3   SRDLILTALAPMIWGSSYIVTTTLLPGQSPLLVALLRALPAGLLLMLMVR----QLP--P 56

Query: 68  ATW--RLFFVQACINSVLPFTLIAWAEQSIDAGLAVILNATTPIFTFLLTALVIRHETVS 125
             W  RL  + A +N  + ++L+  A   +  G+A  L A  P+    L+AL+++    +
Sbjct: 57  LNWVPRLLVLGA-LNFSIFWSLLFVAAYRLPGGVAATLGAVQPLVVVFLSALMLKTPVRT 115

Query: 126 GRKLFGTIAGMTGVCLIIGVEALGGAGEAIWSQLAVLTAAFSYACAAIFSKNFKGLDPVM 185
              L   ++ + GV L++   +    G  +++ LA    A + A   + S+ ++    ++
Sbjct: 116 AAVLAAGLS-ILGVALLVLTPSAQLDGIGVFAGLA---GAIAMAAGVVLSRKWQPPVSLL 171

Query: 186 P-AAGSLICGAVLLLPVSLIVDRPWTLSP----SAASLTALVCLSVFSTALAFMIYFRLM 240
              A  L  G +LL+PV+L     W+L      SA +L  L  +S+   A  ++++FR +
Sbjct: 172 TFTAWQLTAGGLLLIPVTL-----WSLPAFPQLSAENLLGLAYMSLIGGAATYVLWFRGI 226

Query: 241 QTLGSVGTTSQAYLRVPVGVAIGMVFLGEVPTS--AMWVGLVCVIAGVLAMTLPSRRRPA 298
             L     +    L     V +G VFLGEV T+  A   GL      +    L  RRR  
Sbjct: 227 ARLEPSVVSLLGVLSPLSAVVLGWVFLGEVLTAKQATGAGLALFSLWLGQSGLRWRRRRV 286

Query: 299 TQ 300
           TQ
Sbjct: 287 TQ 288