Pairwise Alignments

Query, 251 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 674 a.a., bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (376), Expect = 1e-40
 Identities = 88/233 (37%), Positives = 123/233 (52%), Gaps = 11/233 (4%)

Query: 26  LDWRDGDMPYSRAFDDHFYCQTDGRLECGHVFLSGNGLPQRWLERDGV-FRIGELGFGTG 84
           L W D   P S  FDD ++   +G  E  +VFL  N LPQRW   D   F I E GFGTG
Sbjct: 12  LGWNDAGTPVSDQFDDVYFSNVNGLAETRYVFLEQNHLPQRWHNDDQRRFVIAETGFGTG 71

Query: 85  LNLCETWRQWKEVRNGR-----STLHFVSFELYPMKADEIDRALSRWPEVDAERKALVAR 139
           LN    W+ +   R          LHF+SFE YP+   ++ +A   WPE+    + L   
Sbjct: 72  LNFLAVWQAFVAFREANPDAKLKELHFISFEKYPLSKSDLIQAHQAWPELAQFAQKLHKH 131

Query: 140 WP-AEPQGRVEIELDEATRLTVVCGE---ALAGISGSDLSF-DAWFLDGFAPARNPDMWS 194
           +P A P+ +  +  D    L +  G+    L  ++  +    DAWFLDGFAP++NP+MW+
Sbjct: 132 YPLAIPECQRIVLNDGLVTLDLWFGDIKDCLPKVATQEQGLVDAWFLDGFAPSKNPEMWN 191

Query: 195 LEIMQALFAKTAPGGRFATYAAAGFVRRNLIAAGFDLERRKGFAGKREMLCGT 247
             +   +      G   AT+ +AGFVRR LI AGF +++ KGF  KREM+ G+
Sbjct: 192 QNLFAGMAKLAKHGCTCATFTSAGFVRRGLIDAGFAMKKVKGFGTKREMIAGS 244