Pairwise Alignments

Query, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) from Agrobacterium fabrum C58

Subject, 409 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  378 bits (971), Expect = e-109
 Identities = 211/411 (51%), Positives = 273/411 (66%), Gaps = 14/411 (3%)

Query: 22  AILSLQASPAQAGYAHFIMDANTGKVLAARNADVLNHPASLTKMMTLYMTFEALHAGRLR 81
           A+L   A  A AG A  ++DA TG+VL+A N D L+HPASLTKMMTLYMTFEALH G++ 
Sbjct: 12  AVLFFGAVQAMAGNASLVVDARTGRVLSAENPDTLHHPASLTKMMTLYMTFEALHRGQIA 71

Query: 82  WDQKITMSKNGASVIPSKLYVRQGQTFTVREAVYGMIVKSANDMAEGMGDHLGGSEARFA 141
           W   + +S   A   P+KL V+ G T TV EAVYGMIV+SAND A  M + LGGSE  FA
Sbjct: 72  WKTPVPVSATAARKPPTKLGVKAGGTITVEEAVYGMIVRSANDAAAAMAERLGGSEEGFA 131

Query: 142 EMMTRKARQLGMSKTVFRNASGLPSKSQVTTARDMARLGLALQRDFPKEYGLFAMESFSF 201
            MM  KARQLGM++T F NASGLP+  QVTTARDMARL +AL R +P+EY LF+++SF+F
Sbjct: 132 RMMNAKARQLGMNRTFFVNASGLPASEQVTTARDMARLAVALMRHYPREYRLFSVQSFAF 191

Query: 202 RGKRIRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAINHNGRRVVGVVLGGKTARSRDAQ 261
           RG+ IRGHNNLMYRYQGMDGIKTGYT ASG+NLVSA+N   RR++GVVLGG++ARSRD +
Sbjct: 192 RGRVIRGHNNLMYRYQGMDGIKTGYTRASGYNLVSAVNDRNRRLIGVVLGGRSARSRDEK 251

Query: 262 MAALLDKAVPQASRSRNTEQLVASANVSRTFDVAAALPPASVPLPMFAERRADPVAMQIA 321
           MAALLD+ + + S       ++A+A+  R  DV A+LP  S+   +  +   +PVA    
Sbjct: 252 MAALLDQHLGRVSSP--GRPMIAAASAPRLADV-ASLPGVSLSY-VGTQPAVEPVAA--- 304

Query: 322 TANSQMADMMQVSAIPRPAPAAATTGERSRWEVQIAATDSEAAARSLLANARSNIG-SYT 380
              + +A ++     P P  AA+T      W +QI+   +   AR +L  A+S  G +  
Sbjct: 305 ---APLAGIVPADR-PTPVAAASTAPPAGGWRIQISTAPTAEGARKMLVEAQSAGGAALL 360

Query: 381 GIAPYTEAVQSGSATLYRARFTGFEDQSSAVSACKELKAQSYACVVMTSEG 431
           G AP+TE   SG A  YR  F GF  + +A +AC  LK +SY CV++   G
Sbjct: 361 GAAPHTETAGSGGA--YRIGFAGFASREAAATACSILKKRSYDCVLLPDGG 409