Pairwise Alignments

Query, 431 a.a., D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) from Agrobacterium fabrum C58

Subject, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

 Score =  155 bits (393), Expect = 2e-42
 Identities = 105/340 (30%), Positives = 170/340 (50%), Gaps = 21/340 (6%)

Query: 19  FFCAILSLQASPAQAGYAH----FIMDANTGKVLAARNADVLNHPASLTKMMTLYMTFEA 74
           F  A   L A PAQA         ++D +T  VL  ++ADV   P+S++K+MT YM FE 
Sbjct: 11  FVLAAGLLTAMPAQAFETKARHALVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFER 70

Query: 75  LHAGRLRWDQKITMSKN-----GASVIPSKLYVRQGQTFTVREAVYGMIVKSANDMAEGM 129
           L +G L  D   ++S+N     GA+   S +++  G    V + + G+I++S ND    +
Sbjct: 71  LKSGSLSLDDTFSVSENAWRKGGAASGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVV 130

Query: 130 GDHLGGSEARFAEMMTRKARQLGMSKTVFRNASGLPSKSQVTTARDMARLGLALQRDFPK 189
            ++L G EA FA  M R+A++LG++ + F NA+GLP      TA D+  L   + RDFP+
Sbjct: 131 AENLAGDEATFAAAMNRRAKELGLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPE 190

Query: 190 EYGLFAMESFSFRGKRIRGHNNLMYRYQGMDGIKTGYTNASGFNLVSAINHNGRRVVGVV 249
            Y ++    F++ G      N L+Y   G DG+KTG+TN +GF L ++   +GRR++ V+
Sbjct: 191 FYEIYGETKFTYNGIVQHNRNPLLYMNMGADGLKTGHTNIAGFGLTASAVQDGRRLLMVI 250

Query: 250 LGGKTARSRDAQMAALLDKAVPQASRSRNTEQLVASANVSRTFDVAAALPPASVPLPMFA 309
            G ++ + R  +   L+        R+  T  L+ +       DV       +VPL    
Sbjct: 251 NGLQSNKERSEEAERLMS----WGFRNFETVTLLKAGQPISDADVWMG-EEETVPLVSVN 305

Query: 310 ERRADPVAMQIATANSQMADMMQVSAIPRPAPAAATTGER 349
           +       ++I    +   DM+  +    P PA    G+R
Sbjct: 306 D-------LKITLPRAARRDMVAKAVFETPIPAPIQAGDR 338