Pairwise Alignments

Query, 295 a.a., 2-dehydro-3-deoxygluconokinase from Agrobacterium fabrum C58

Subject, 313 a.a., 2-dehydro-3-deoxygluconokinase from Herbaspirillum seropedicae SmR1

 Score = 72.8 bits (177), Expect = 9e-18
 Identities = 71/276 (25%), Positives = 113/276 (40%), Gaps = 23/276 (8%)

Query: 13  RKGFAGDTFNAAWYARACLPQDWSVDYFTALGDDPLSEDMLAFIAEAGIGTEKIRRIKGG 72
           R+    +T  A   AR  L   W+    + +G+D     +   +A+ G+   ++ R+   
Sbjct: 33  RRLAGAETNVAIGLARLGLKVGWA----SRVGNDAFGRFIRQRVAQEGV---EVSRVITD 85

Query: 73  TPGLYLINLK-----DGERTFSYWRNAAAARQLAADADHLRKTVESADVVYFSGITLAI- 126
                 I LK       +    Y+R  +AA  L+ D D       +A  ++ +GI  A+ 
Sbjct: 86  MEFRTAIQLKAKAVGGADPAIEYYRKGSAASHLSVD-DFDAGYFGAARHLHATGIAPALS 144

Query: 127 ---LASAHDVDTFLAELRRARAAGKLVVFDPNIRPRLWADRDVMLETISNGARAATLVMP 183
              +A AH    F+      R  GK + FDPN+RP LW  ++VM + ++  A  A  V+P
Sbjct: 145 ATTMAFAHQAMDFM------RGQGKTISFDPNLRPMLWPSQEVMAQQLNALAFKADWVLP 198

Query: 184 SFDDEASHFGDVSVEATIARYRSLGVENIVVKDGAKGATLDFGGSRSHAPAEKAVDVVDT 243
              +     G          Y   GV+ +V+K GA+GA    G            +VVDT
Sbjct: 199 GLSEGKILTGHDDAREIAGFYLERGVKLVVIKLGAEGAYWRNGQGEGRVAGVPVKEVVDT 258

Query: 244 TSAGDSFNGAFLARYVTGSSPEEAATFAARAAATVI 279
             AGD F    ++  + G    +A     R  A  I
Sbjct: 259 VGAGDGFAVGVISGMLEGLPVPQAVMRGNRIGAFAI 294