Pairwise Alignments

Query, 317 a.a., ABC transporter, substrate binding protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 295 a.a., glycine betaine ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score =  125 bits (315), Expect = 9e-34
 Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 6/267 (2%)

Query: 32  GTVRFSDVGWTDITATTATATVLLKSLGYETDVKLLSVPVTYTSLKNKDIDVFLGNWMPT 91
           GT++F    W  +T  +    V+L+  GY  ++  L   +TY  L + D+DV L  W+PT
Sbjct: 34  GTIKFGLPPWPGVTVKSNVVKVILEEQGYNVELNQLDAGITYAKLADGDLDVSLAGWLPT 93

Query: 92  MEGDIAPYRDDKSVETLRENLTGAKYTLATNAKGAELGIKDFKDIAAHSSELGGKIYGIE 151
              +      ++ +E +  N+      LA      E GI+   D+  +     GKI GIE
Sbjct: 94  THEEYWTQYGNQ-LEMVHVNVGKTALGLAVPTYTYEAGIQSITDLNGNEELFDGKIIGIE 152

Query: 152 PGNDGNRLILDMVAKDSFGLKSFEVVESSEQGMLSQVARAEKSGEPIVFLGWEPHPMNAN 211
           PG     +     A DS+ L  +E+  SS   M++++ARA    E IV   WEPH +   
Sbjct: 153 PG--AGIMSNTEKAIDSYSLSGYELQSSSTPAMMAELARAINEDENIVVTVWEPHSVFFK 210

Query: 212 FKLTYLTGGDEVFGPNFGGATIYTNVRKGYVEECPNVGAFLKNLQFSLPMENEIMGKILN 271
           F +  L   ++V+G    G  +YT  R  + ++ P V  F +  +    +++E + K  +
Sbjct: 211 FDIKMLDDPEKVYG---DGDKVYTIARTDFKDDYPEVYEFFQKFEVDPSVQSEWIYKYSD 267

Query: 272 DGLEGEAAATAWLKANPAAIEPWFANV 298
           +G++ E  A  W+  NP  +E W +++
Sbjct: 268 EGMDPEEVAEEWVANNPELVENWTSHM 294