Pairwise Alignments

Query, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 280 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  229 bits (583), Expect = 8e-65
 Identities = 126/269 (46%), Positives = 176/269 (65%)

Query: 70  RLPIGRYAKEAIDWLTGNLAFFFDWLSFIFQSVINALLYVLQAPHPLIIVAIVTALSAWT 129
           R+P+G++ + AID+L  +LA      S + +S +N L   L A  PL+++A V  ++   
Sbjct: 7   RIPLGQWLEAAIDFLVTHLAPATRAFSAVTESGLNLLEAGLDALPPLLVIAFVGLVAWRV 66

Query: 130 RRSAGMPIFTALGLLLIINLGYWKATTETLALVIAASAVCMIIGIPLGILAARRKWIYAG 189
            R   + +F   GL L+ N+G W+AT  TLALV+ A+ + +++GIPLGI AA      A 
Sbjct: 67  TRQVALGVFAVAGLALVWNMGLWQATMSTLALVLVATLLAVLVGIPLGIAAAMSDRARAV 126

Query: 190 MRPALDLMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPALVE 249
           + P LD+MQT+P FVYLIPA+  FGLG V  + ATVIFA+P  +R T LGI   P  LVE
Sbjct: 127 VMPVLDVMQTMPAFVYLIPAIPFFGLGKVAAVFATVIFAMPPAIRFTCLGIRQVPAELVE 186

Query: 250 AAVAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVRALN 309
            A AFG    Q L K+ELP AAP ++AG+ QT+ML+LSMVVI+A++GA GLG  V +A+ 
Sbjct: 187 CAEAFGTGRFQRLVKLELPLAAPTMLAGVNQTVMLALSMVVIAAMIGARGLGGEVWKAIQ 246

Query: 310 TVNIAMGFEAGLCIVILAIVLDRLFRLPG 338
            + +  GFEAG+ IVI+AI LDR+ +  G
Sbjct: 247 RLEMGNGFEAGIGIVIVAICLDRILQHVG 275