Pairwise Alignments

Query, 343 a.a., ABC transporter, membrane spanning protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 513 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  202 bits (515), Expect = 1e-56
 Identities = 109/267 (40%), Positives = 165/267 (61%), Gaps = 1/267 (0%)

Query: 67  PENRLPIGRYAKEAIDWLTGNLAFFFDWLSFIFQSVINALLYVLQAPHPLIIVAIVTALS 126
           P+ RL    + ++ I W   N   FFD L+F  +++++AL  +L    P I++A +  L 
Sbjct: 242 PDIRLTGIAWVEDFIAWTVRNTEAFFDALTFGIRTLLDALEVIL-VQTPWIVIASLIVLL 300

Query: 127 AWTRRSAGMPIFTALGLLLIINLGYWKATTETLALVIAASAVCMIIGIPLGILAARRKWI 186
            W        I+++  L  +  LG+W+A   TLAL+  A+ + ++IGIPLG+ AARR   
Sbjct: 301 TWLTAGLRTAIYSSAFLAYMGLLGFWEAAMTTLALLGTAACLSIVIGIPLGMFAARRPRF 360

Query: 187 YAGMRPALDLMQTIPTFVYLIPALVLFGLGMVPGLIATVIFAIPAPVRLTRLGIVSTPPA 246
           YA ++P +D MQT+P FV+++P +  FG+G    +I T+IF     VRLT LG+   P +
Sbjct: 361 YAFIQPIMDFMQTMPAFVFMVPVIAFFGVGKPAAVIVTMIFGGTPVVRLTVLGLRGVPES 420

Query: 247 LVEAAVAFGATPSQVLRKVELPFAAPQIMAGLTQTIMLSLSMVVISALVGANGLGVPVVR 306
           + EAA++FGA    +L KV+LP A P I AG+ QTIMLSL+MVV+++L+GA GLG  V+ 
Sbjct: 421 VREAAISFGANKWYLLTKVDLPLAGPSIRAGINQTIMLSLAMVVVASLIGAKGLGEDVLE 480

Query: 307 ALNTVNIAMGFEAGLCIVILAIVLDRL 333
           AL   N+  G  AG  I+  A++LDR+
Sbjct: 481 ALQYANVGQGILAGFSILFCAMILDRI 507