Pairwise Alignments

Query, 348 a.a., ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) from Agrobacterium fabrum C58

Subject, 397 a.a., glycine betaine/L-proline ABC transporter, ATPase subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  258 bits (658), Expect = 2e-73
 Identities = 153/332 (46%), Positives = 201/332 (60%), Gaps = 15/332 (4%)

Query: 13  VFGDRPDAALALIDKGSTRDEINAQTGLVLGVANASLSVSEGEILVLMGLSGSGKSTLVR 72
           +FG  P+ ALA++  G  +DEI  +T   +GV  A+  V EGEI+V+MGLSGSGKSTLVR
Sbjct: 12  IFGPVPEKALAMVRAGKPKDEIYKRTKHAVGVNRATFDVDEGEIVVVMGLSGSGKSTLVR 71

Query: 73  AVNGLAPVVRGSVSVKTKSGYVDPYRCPAKALRDLRMHTVSMVFQQFGLLPWRNVADNVG 132
            +N L     G+V +       D      K LR LR  T  MVFQ F L P R V +N  
Sbjct: 72  CLNRLIEPTDGTVRIDG----TDVTTLSVKDLRALRQRTFGMVFQNFALFPHRTVLENAE 127

Query: 133 FGLELSGVPEAERKRMVAEQLELVNLSAWADRKVGELSGGMQQRVGLARAFATGAPILLM 192
           +GLE+ G  +A R+   AE L  V L+ W   + G+LSGGMQQRVGLARA A    ILLM
Sbjct: 128 YGLEVMGAAKATRRDKAAEALARVGLAGWEAARPGQLSGGMQQRVGLARALALDPDILLM 187

Query: 193 DEPFSALDPLIRSRLQDELLEFQSRLKKTILFVSHDLDEAFRIGNRIAMMEGGHIIQCGT 252
           DE FSALDPLIR  +QDELL  Q  ++KTI+F+SHDLDEA +IG+RI +M  G ++Q GT
Sbjct: 188 DEAFSALDPLIRRDMQDELLRLQDDVRKTIVFISHDLDEALKIGDRIVLMRDGAVVQVGT 247

Query: 253 PQQIVRQPATPYVADFVQNMNPISMLTAADVMKRGVDERSGRLTVAATALPSSPLIDILD 312
           P+ I+  PA  YVA FV +++   +LTA  VMK     RS  + V     P +     L 
Sbjct: 248 PEDILTSPADDYVARFVADVDIARVLTAGTVMK-----RSEAVAVLGVDGPRT----ALR 298

Query: 313 ALSKHA-GAIGVVD-NGAIIGTISADEVVAGL 342
            +  HA   + V+D N  ++G ++AD++V  L
Sbjct: 299 KMRNHAIATLFVLDRNHKLVGLVTADDIVEHL 330