Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 372 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Pseudomonas stutzeri RCH2

 Score =  261 bits (668), Expect = 2e-74
 Identities = 146/363 (40%), Positives = 214/363 (58%), Gaps = 7/363 (1%)

Query: 2   KLKTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGGI 61
           K+    ++T AAS+    LA   I IGL  P+TGPVA YGD    GA+ A+ +INK GG+
Sbjct: 9   KIFLAMALTGAASYT---LAADTIRIGLAGPVTGPVAQYGDMQFIGAEMAIEQINKAGGV 65

Query: 62  LGEQVVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVTP 121
            G Q+     DD  +PKQ V+ AN++V + + FVVG + S    PASD++ + G+LM+T 
Sbjct: 66  NGAQLKGVRYDDACDPKQAVAVANKIVNDNVKFVVGHLCSSSTQPASDIYEDEGILMITA 125

Query: 122 TATAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSFK 181
            +T+P +T+RG   +FRT G D  Q   A  ++  ++K K +A+IHDK  YG+G+A + K
Sbjct: 126 ASTSPDITSRGYELIFRTIGLDSLQGPTAGNFIADHVKPKNVAVIHDKQQYGEGIATAVK 185

Query: 182 ATLNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGSK 241
            TL    +   L++ +  G+KD  +L A+LK +  D VY+GGYHPE GLL+RQ K+ G  
Sbjct: 186 QTLEGKNIKVGLFEGINAGDKDFSSLIAKLKREGVDFVYYGGYHPELGLLLRQSKEKGLN 245

Query: 242 AAVIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKA-ANIPAEAFTLN 300
              +G +G+ NSE   I   A EG   T      ++  +K   +  KA    P+  F   
Sbjct: 246 VRFMGPEGVGNSEISAIAGPASEGMYVTLPKSFDQDPRNKELVDGFKAKKQDPSGPFVFP 305

Query: 301 AYAAVEVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKW- 359
           AYAAV+V+  GIEKAGS  D++ VA+ L+S   F T  G +++ + GDL    F +++W 
Sbjct: 306 AYAAVQVIAEGIEKAGST-DTDKVAEALRS-NTFDTPTGMLSFDEKGDLKDFNFVVYEWH 363

Query: 360 QDG 362
           QDG
Sbjct: 364 QDG 366