Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 368 a.a., Extracellular ligand-binding receptor (NCBI) from Rhodospirillum rubrum S1H

 Score =  327 bits (839), Expect = 2e-94
 Identities = 167/355 (47%), Positives = 234/355 (65%), Gaps = 5/355 (1%)

Query: 11  LAASFAFAP---LAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGGILGEQVV 67
           LAA+ AFA     A A+I +G+  P+TG  A++G+Q+  GA+ AV +IN KGG+LGE++V
Sbjct: 9   LAATAAFAMGVGSAQADITVGVAGPMTGQYASFGEQLAKGAEQAVKDINAKGGVLGEKLV 68

Query: 68  LKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVTPTATAPG 127
           LK  DD  +PKQ V+ ANQ V + + FV G   SG +IPAS V+ E G++ ++P +T P 
Sbjct: 69  LKKGDDACDPKQAVAVANQFVNDKVVFVAGHFCSGSSIPASAVYNEEGIVQISPASTNPK 128

Query: 128 LTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSFKATLNAG 187
           LT +G  NVFRTCGRDDQQ   A  ++ A+  G+KIAIIHDK AYGKGLAD  K+ LN  
Sbjct: 129 LTEQGFENVFRTCGRDDQQGPTAGDFLKAHFPGQKIAIIHDKTAYGKGLADETKSALNKA 188

Query: 188 GVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGSKAAVIGG 247
           GV E LY+A+T GEKD  AL  +LK++   I+Y GGYH EAGL++RQ K+ G  A ++ G
Sbjct: 189 GVQEALYEAITAGEKDYSALVTKLKNEGIKIIYLGGYHTEAGLIIRQAKEQGLDARIVSG 248

Query: 248 DGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALKAANIPAEAFTLNAYAAVEV 307
           D L +SEF +I   AG+GT+FT + D  KN ++ A  ++   A   AE +TL  Y AV+ 
Sbjct: 249 DALVSSEFASIAGPAGDGTLFTFSPDPRKNPEAAAVVKSFTDAGYNAEGYTLYTYGAVQA 308

Query: 308 LKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKWQDG 362
               +EKA S  D + VAK LKSG+ F T +G + +   GD+++  + +++W+ G
Sbjct: 309 WAQAVEKAKST-DVDKVAKALKSGQ-FSTVLGPIGFDAQGDVSAPGYVMYEWKGG 361