Pairwise Alignments

Query, 368 a.a., ABC transporter, substrate binding protein (branched chain amino acid) from Agrobacterium fabrum C58

Subject, 370 a.a., high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein from Marinobacter adhaerens HP15

 Score =  266 bits (680), Expect = 7e-76
 Identities = 143/357 (40%), Positives = 215/357 (60%), Gaps = 4/357 (1%)

Query: 4   KTLTSVTLAASFAFAPLAHAEIVIGLIAPLTGPVAAYGDQVKNGAQTAVSEINKKGGILG 63
           K +T+V+ + +   A  A AEI IG+  P+TGPVA YGD   +GA+ A+ +IN  GG++G
Sbjct: 7   KLVTAVSTSVALMGAGHAAAEIQIGIAGPMTGPVAQYGDMQFSGARMAIEQINANGGVMG 66

Query: 64  EQVVLKLADDGGEPKQGVSAANQLVAEGIHFVVGPVTSGVAIPASDVFAENGVLMVTPTA 123
           E++V    DD  +PKQ V+ AN LV +G+ FV+G + S    PASD++ + G+LMVTP +
Sbjct: 67  EELVAVEYDDVCDPKQAVTVANSLVNDGVRFVIGHLCSSSTQPASDIYEDEGILMVTPAS 126

Query: 124 TAPGLTNRGLSNVFRTCGRDDQQAEVAAKYVLANLKGKKIAIIHDKGAYGKGLADSFKAT 183
           T+P +T RG   VFRT G D  Q  VAA+Y+ A+   +++AI+HDK  YG+G+A + + T
Sbjct: 127 TSPEITERGYELVFRTIGLDSMQGPVAARYI-ASQNPERVAIVHDKQQYGEGIATAVRDT 185

Query: 184 LNAGGVTEVLYDALTPGEKDLGALTARLKSDNADIVYFGGYHPEAGLLVRQLKDIGSKAA 243
           L   GV   +++ +T G+KD  +L  +LK  + D VY+GGYHPE GL++RQ       A 
Sbjct: 186 LKDAGVEIAMFEGITAGDKDFSSLVTKLKQADVDYVYYGGYHPELGLILRQANSADLDAR 245

Query: 244 VIGGDGLSNSEFWNIGAKAGEGTIFTNASDALKNDDSKAAAEALK-AANIPAEAFTLNAY 302
            +G +G+ N +   I  +A EG + T      +  +++A  +A +     P+  F L +Y
Sbjct: 246 FMGPEGVGNKDINTIAGEAAEGLLVTLPPAFDQKAENQALVKAFEDKGEDPSGPFVLTSY 305

Query: 303 AAVEVLKAGIEKAGSAKDSEAVAKVLKSGEAFPTAIGKVTYGDNGDLTSQAFSLFKW 359
            AV+++  GIE AGS  D   VA  L+ G  F T IG V Y   GD+ S  F +++W
Sbjct: 306 TAVQLVAEGIEAAGST-DPFDVAAALREG-TFQTPIGTVEYDKAGDMKSFEFVVYEW 360