Pairwise Alignments

Query, 300 a.a., cation efflux system protein from Agrobacterium fabrum C58

Subject, 291 a.a., cation diffusion facilitator family transporter from Methanococcus maripaludis S2

 Score =  114 bits (286), Expect = 2e-30
 Identities = 80/286 (27%), Positives = 142/286 (49%), Gaps = 9/286 (3%)

Query: 5   GNALVRKLAFWGIPLSFGVLGLKLVAWWVTGSVALLSDGLESTVNVVAAFIAYFVIRYAQ 64
           GN + +      I LS     LK++A     S AL++DG+ S  ++++  +    ++ ++
Sbjct: 10  GNKISKITIIANIALSI----LKILAGVFGKSSALIADGMHSFSDILSTVVVMLGLKLSE 65

Query: 65  KPADDDHQFGHHKAEYISAVVEGVLIVVAALLIVQEAWGALFNPRLPEAPALGLAINAMA 124
           KPAD+ H +GH + E     +  V+++V AL+I       +      + P     I A+ 
Sbjct: 66  KPADESHPYGHERIEPALTKILAVILLVTALMIFYCGLTTIIGGNY-QIPGNITIIAALI 124

Query: 125 GVINAVWATILIRVGKKH-SSPALAADGHHIMSDVVTSVGVLVGLVLALMTGYAILDPLL 183
            +    W     + G +   S AL AD  H  SD  +SVG L+G+V A + GY ILDP+ 
Sbjct: 125 SIFTKEWMYKYTKKGAEQIESSALLADAWHHRSDAFSSVGTLIGVVGAKL-GYPILDPIA 183

Query: 184 AILVAINILFQGSKVIIHSLGGLMDRAVEPEEDEAIKKAIAENSGGVIGVHDLRTRRAGS 243
           +I++++ I     ++   +L  L+DRA + +  E IKK I  +  GV+ +  L+TR   +
Sbjct: 184 SIVISLFIAKMAFEIYFKALNQLLDRAADSKTIEEIKKIIL-SVDGVLEIDVLKTRIHSN 242

Query: 244 AAFIDFHVVVPASMTVQEAHDICDRLEDAIRDVIPGAS-LAIHVEP 288
             ++D  + V   +++ EAH+I + +   I   +       +HV P
Sbjct: 243 KIYVDVEISVDKDLSLIEAHNISENVHSQIESKLKRVKHCMVHVNP 288