Pairwise Alignments

Query, 169 a.a., ECF family sigma factor from Agrobacterium fabrum C58

Subject, 180 a.a., RNA polymerase ECF sigma factor from Sinorhizobium meliloti 1021

 Score = 44.3 bits (103), Expect = 1e-09
 Identities = 41/133 (30%), Positives = 57/133 (42%), Gaps = 16/133 (12%)

Query: 19  LRRLLVAYYGRRMADAARADVEDLVQETLLSLHAKRETYDRARPFTAWFFSIARYKLIDH 78
           LRR  ++  G R  D A    +DLVQ       A  E ++    F AW F I R   ID 
Sbjct: 19  LRRFAISLCGSR--DVA----DDLVQSACERALASAERFEPGTRFDAWIFRILRNLWIDQ 72

Query: 79  YRGRGRRMFSEVELDET-------LEAESSVDAVTARMDVERLLNELPERQRDLIRRVKL 131
            R   R+  + V+ D T          E   +A      V   + ELP+ QR+++  V +
Sbjct: 73  VR---RQKTAGVQDDITERHDIAGSSGERETEARLTLKTVAEAITELPDEQREVVLLVCV 129

Query: 132 EGQSIAEAAEKSG 144
           E  S  EAA+  G
Sbjct: 130 EELSYREAADVMG 142