Pairwise Alignments

Query, 169 a.a., ECF family sigma factor from Agrobacterium fabrum C58

Subject, 167 a.a., RNA polymerase subunit sigma from Pedobacter sp. GW460-11-11-14-LB5

 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 39/139 (28%), Positives = 66/139 (47%), Gaps = 19/139 (13%)

Query: 38  DVEDLVQETLLSLHAKRETYDRARPFTAWFFSIARYKLIDHYRGRGRRMFSEVELDETLE 97
           D  DLVQ+TL+     +E +++   F  W F I R   I+ YR + ++  S + ++E L 
Sbjct: 30  DANDLVQDTLIKALRFKEGFEQGSNFKGWLFVIMRNTFINDYRKKAKKN-SIITIEEELS 88

Query: 98  AE--------SSVDAVTARMDVERLLNELPERQR-DLIRRVKLEGQSIAEAAEKSG---- 144
           +         +  +   A  D+   L+ LPE  R   +R V  EG    E A++ G    
Sbjct: 89  SAQLAGNASLNGAEHKFAMQDINNALHRLPEAHRLPFVRYV--EGYKYHEIADELGIPLG 146

Query: 145 --QTEL-AARVGIHRTLKV 160
             +T +  AR+ + +TLK+
Sbjct: 147 TVKTHIHQARLELKKTLKI 165