Pairwise Alignments

Query, 169 a.a., ECF family sigma factor from Agrobacterium fabrum C58

Subject, 189 a.a., RNA polymerase, sigma-24 subunit, ECF subfamily (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 45.1 bits (105), Expect = 7e-10
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 11/137 (8%)

Query: 12  YRHLLHALRRLLVAYYGRRMADAARADVEDLVQETLLSLHAKRETYDRARPFTA-WFFSI 70
           +RH    ++  L+       + A+    ED  Q+ + ++  K   +D +R   A W F+I
Sbjct: 37  FRHFAPRIKAFLIK------SGASDTLAEDCAQDVMTTVWQKAHMFDPSRASVATWIFTI 90

Query: 71  ARYKLIDHYRGRGRRMFSEVELDETLEAESSVDAVTARMDVERL---LNELPERQRDLIR 127
           AR + ID  R   R    E+      E + + D +  + + E+L   L +LPE+QR L+ 
Sbjct: 91  ARNRRIDMLRKERRPEPEELPWGPEPEPDQA-DVLMLQQESEKLQAALIQLPEKQRILVE 149

Query: 128 RVKLEGQSIAEAAEKSG 144
           R      S +E A ++G
Sbjct: 150 RCYFGDMSHSEIATQTG 166