Pairwise Alignments

Query, 169 a.a., ECF family sigma factor from Agrobacterium fabrum C58

Subject, 184 a.a., RNA polymerase subunit sigma-24 from Burkholderia phytofirmans PsJN

 Score = 48.9 bits (115), Expect = 5e-11
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)

Query: 20  RRLLVAYYGRRMADAARADVEDLVQETLLSLHAKRETYDRARPF---TAWFFSIARYKLI 76
           R  LV +  RR+ D    D ED++Q+     H   + Y    P    +AW F  AR +++
Sbjct: 16  RTRLVNFIRRRIRDPD--DAEDILQDVF---HEFVQAYRLPAPIEQASAWLFRAARNRIV 70

Query: 77  DHYRGR-----------GRRMFSEVELDETLEA-ESSVDAVTARM----DVERLLNELPE 120
           D +R +           G    SE  LD  L A ++  +A+ AR      ++  L+ELP 
Sbjct: 71  DRFRKKKEQPLADLSASGDDADSEYRLDLDLPAHDAGPEALYARALLLKALQDALDELPA 130

Query: 121 RQRDLIRRVKLEGQSIAEAAEKSGQT 146
            QR++    +LEG+S  E A +SG T
Sbjct: 131 NQREVFVAHELEGRSFKEMAAESGVT 156