Pairwise Alignments

Query, 616 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  234 bits (598), Expect = 7e-66
 Identities = 162/487 (33%), Positives = 250/487 (51%), Gaps = 18/487 (3%)

Query: 120 KMHRFLLRHSMNFFANEFAGRVSTKVMQTALAIREVALKVIDVFVYAISFVVSMLFMVAA 179
           K+ + L    + FF +   G + T+V +    IRE     +      + F+   L++++ 
Sbjct: 237 KLVQHLFGLPLMFFKSRQVGAIVTRVRELD-TIREFLTGSMFTLTVELLFMFVFLYVMSL 295

Query: 180 ADWRLVIPLLIWLGIYMAILAYFVPKLGRLAQEQADARSMMTGRIVDSYTNISTIKLFSH 239
               L    +  +  Y+ +  +  P++    ++Q    +  T  + ++     T+K  + 
Sbjct: 296 LSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAV 355

Query: 240 AGREERYAREGMNVFLGTVHRQMRKISGFNILIDLNNAVVLFSTATLGLYFWMQGSVTAG 299
             R  R   E     + T +   +  +  N L+ L   +   S A L L     G+    
Sbjct: 356 EPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKIT--SVAILWL-----GATEVL 408

Query: 300 SVAIAISLAMRVNGMSQWIMWEVTSLFENIGTVYDGMSMMTKPHDIVDVPKAPELAAPQ- 358
           S+ + I   +  N M+  I   +  + E  G        + K  D++++P      +   
Sbjct: 409 SLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNV 468

Query: 359 ---GAIHYDNVRFHYGKN-KGVIDGLTLDIKPGEKVGLVGRSGAGKTTLMNLLLRFYDLE 414
              GAI + N+ F Y  +    I+ L+LDI+ GE +G+VG SG+GK+TL  LLLR Y  E
Sbjct: 469 TISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPE 528

Query: 415 GGRITIDGQDISKVSQDSLRELIGVVTQDTSLLHRSIRDNIAYGHPEATDEQVIAAAKRA 474
            G ITIDG  ++ ++   LR+ +GVV Q+  L H+S+ +NIA   PEA+ E++I AAK +
Sbjct: 529 QGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLS 588

Query: 475 NAWDFIETLVDMHGRQGLDAQVGERGVKLSGGQRQRIAIARVFLKNAPILVLDEATSALD 534
            A DFI  L       G D  + E G  LSGGQRQR+AIAR  L +  +L+LDEATSALD
Sbjct: 589 GAHDFILKLP-----MGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALD 643

Query: 535 SEVEAAIQENLFSLMEGKTVIAIAHRLSTLTEMDRLIILDKGRIVEAGSHAELAAMGGIY 594
            E +A IQ N+ S+  G+TVI IAHRLST+ + DR+I+L +G IVE GSH +L A G  Y
Sbjct: 644 DESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQY 703

Query: 595 ADLWRRQ 601
             LW+ Q
Sbjct: 704 KQLWQLQ 710