Pairwise Alignments

Query, 616 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (594), Expect = 2e-65
 Identities = 169/543 (31%), Positives = 271/543 (49%), Gaps = 48/543 (8%)

Query: 82  HLIVMAGLVLFLLPLMGAIHTMTMHQTLAGNFGMIARWKMHRFLLRHSMNFFANEFAGRV 141
           H++ +A L L +     +    T+   LA         +++R L+   + +F     G++
Sbjct: 205 HVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQI 264

Query: 142 STKVMQTALAIREV----ALKVIDVFVYAISFVVSMLFMVAAADWRLVIPLLIWLGIYMA 197
             +V + A  IR+      L ++   ++   F+  M    +   W LVI  L+   IY  
Sbjct: 265 IARVREMA-QIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTW-LVIGSLV---IYFV 319

Query: 198 ILAYFVPKLGRLAQEQADARSMMTGRIVDSYTNISTIKLFSHAGREERYAREGMNVFLGT 257
           +     P + +  + + ++ +  T  + ++ T I TIK       E R+  +   +    
Sbjct: 320 LWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKT---TATEHRFLEQWQRILSQQ 376

Query: 258 VHRQM-RKISGFNILIDLNNAVVLFSTATLGLYFW------MQGSVTAGSVAIAISLAMR 310
           ++R    + SG    +    A+ L    T  L  W      ++G +T G +       + 
Sbjct: 377 LNRSFDAQKSG----LIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQL-------VA 425

Query: 311 VNGMSQWIMWEVTSLFENIGTVYDGMSMMTKPHDIVDVPK---------APELAAPQGAI 361
            N ++  +   V  L +        +  + +  DI+D P+          PEL    G I
Sbjct: 426 FNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLASVPEL---DGGI 482

Query: 362 HYDNVRFHYGKNKG-VIDGLTLDIKPGEKVGLVGRSGAGKTTLMNLLLRFYDLEGGRITI 420
            + N+RF Y ++   V+  L+L IKPG+ +G+ G SG+GK+TL  LL R Y  + G++ +
Sbjct: 483 EFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLV 542

Query: 421 DGQDISKVSQDSLRELIGVVTQDTSLLHRSIRDNIAYGHPEATDEQVIAAAKRANAWDFI 480
           DG D++     SLR  + VV Q++ L   S+ DNI    P+A+DE++  AA+ A A  FI
Sbjct: 543 DGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFI 602

Query: 481 ETLVDMHGRQGLDAQVGERGVKLSGGQRQRIAIARVFLKNAPILVLDEATSALDSEVEAA 540
           E L       G +  VGE+G  LSGGQRQRIA+AR  L N  IL+LDEATSALD   EA+
Sbjct: 603 EGLP-----HGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEAS 657

Query: 541 IQENLFSLMEGKTVIAIAHRLSTLTEMDRLIILDKGRIVEAGSHAELAAMGGIYADLWRR 600
           I  N+  +  G+TVI+IAHRL+T+   D + +LDKG++ E+G+H EL A  G+YA LW +
Sbjct: 658 IMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWTQ 717

Query: 601 QSG 603
           Q G
Sbjct: 718 QVG 720