Pairwise Alignments

Query, 459 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 443 a.a., Signal transduction histidine kinase from Pseudomonas stutzeri RCH2

 Score =  142 bits (359), Expect = 2e-38
 Identities = 121/456 (26%), Positives = 195/456 (42%), Gaps = 60/456 (13%)

Query: 29  WLPTGLYTRSLLIIILPMILLQAVVAAVFMERHWQLVTERLSAAVTRDISAVIELLQTDP 88
           W P   + R+L ++++ ++  + +     M     LV  + S      + A       D 
Sbjct: 6   WFPQSFFARTLWMVLIVVLFSKVLTLVYLMTNEDVLVDRQYSHGAALTLRAY---WAADL 62

Query: 89  EEDDYQRVIRIAREKLDLSVYIEPKTDLPAPKPE---PLFSILDRILADQLKQQIGRPFW 145
           E+          R+++  +  + P  +   P+ E   P   I  R + D+L         
Sbjct: 63  ED----------RDRIGRAAGLLPVAEQNVPRSEYHWPYTEIFQRQMRDEL--------- 103

Query: 146 IDTYGNGSLVEIRVQLEDKT-----------------LRVFTSRSSAYASNTHIFLVWMV 188
                 G   E+RV+++  T                 L  +  R     S     L W +
Sbjct: 104 ------GDDTEVRVRIQPSTAIWVRAPNLGPDWVQVPLYAYPLRGQRIWS----VLGWFL 153

Query: 189 GASLVLIAISILFLRGQIKPIEALAKAAENFGKGQKISGYSPRGADEVRRAGLAFILMRE 248
           G  L+    + +F+     P++ L  AA   GKG+++         E+     AF  M E
Sbjct: 154 GIGLLSTGAAWIFVSQLNLPLKRLVFAARQIGKGRRVRLPISDTPSEMTEVYRAFNQMAE 213

Query: 249 RIERQMEQRTAMLNGVSHDLRTILTRFKLQLALAGDNPDL-EGLDKDVDDMQSMLEAYLT 307
            +E+   +R  ML GVSHDLRT LTR +L L L   + +L E + +DV+DM ++L+ +L 
Sbjct: 214 DVEQAGRERELMLAGVSHDLRTPLTRLRLSLELMSSDDELTEDMIRDVEDMNAILDQFLA 273

Query: 308 FARTEVEEDVGTLELPALLEKIGHDFELHGKKFSYQLYNIERIIARPNALSRLVANLAEN 367
           F R   +E V T +L  L+ ++   +    +     +  +     R  ++ RL+ NL EN
Sbjct: 274 FVRDGSDEPVETTDLGELIREVVAPYNQQQETVRLCVEPMPPFALRRVSIKRLLVNLIEN 333

Query: 368 ARRYASN-----LHVDIRKAPRSIIMTFDDDGPGIPEISREDVFKPFFRLDEARNLNASG 422
           A RYA        +V   +    ++++  D GPG+     E +F PF R D AR     G
Sbjct: 334 ALRYAGGGVEVAAYVSGDQHAPYVVLSVLDRGPGVDPAELEGIFNPFIRGDRAR--GGQG 391

Query: 423 TGLGLSIVRDIARSHGGDVSLDESPMGGLRVIVKIP 458
            GLGL+IV+ IA  HGG V L     GGL   V +P
Sbjct: 392 AGLGLAIVKRIASQHGGIVELRNREGGGLEARVSLP 427