Pairwise Alignments

Query, 300 a.a., permease from Agrobacterium fabrum C58

Subject, 287 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 60/280 (21%), Positives = 126/280 (45%), Gaps = 4/280 (1%)

Query: 2   TRVQANMLLLLAAAIWGGGFVAQSSAMSSIGPFWFVGLRFAIAAIAVLPFALMETRSLKS 61
           TR  A +LL++   +  GG+V    A+  + PF F+GLRF  A++ +LPF L   +    
Sbjct: 3   TRFPAELLLVVTTLLAAGGWVFSKQAIQELPPFGFIGLRFIAASLCLLPFCLNALKQASR 62

Query: 62  PPRRREIGSFILVGLALFGGATTQQVGLLTTTVTNSSFLTGLYVIFVPVIAVVLYRRHPH 121
               + +G  +L+  +LF       +   + T+   +F+  L ++FVP++A  ++ + P 
Sbjct: 63  QACFQSMGVGVLLAASLFCWIHAISI---SDTLGEGAFIMSLSMLFVPLLAWPIFGQRPI 119

Query: 122 WVVWPCALMMLGGIFLLSGGAFETLTTGDILSIICAFFWAIQITLAGRFVSESGRPLALS 181
              W    + + G+FLL+           +  +  +   A+      RF S+   P+ L+
Sbjct: 120 RAFWLSLPVAVVGLFLLAWNGTWQFAANQLWFLAASCCLALHFNFNSRFSSQL-PPMLLT 178

Query: 182 FTQFAVCSLLSCMIGVVFEPISMAAIEASMMEILYVGLVSSGLAFVLQVIGQRYTTAPQA 241
             Q      L   +  + E         +        L+++ L +++Q +GQ+      A
Sbjct: 179 TLQLFTAGCLGITLSWLTESWPATISPVTWKWFALSVLLATSLRYLMQTMGQKSANPTNA 238

Query: 242 AIFLSSEALFGALMASIFLKETISSAGYVGCLIIFVAILI 281
           A+ +  E ++  +++ +  +ET+     +GC  +  ++L+
Sbjct: 239 ALLMLLEPVWTLVLSVVIYQETMPFNKMLGCGFLLASLLL 278