Pairwise Alignments

Query, 300 a.a., permease from Agrobacterium fabrum C58

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 53.5 bits (127), Expect = 6e-12
 Identities = 60/288 (20%), Positives = 115/288 (39%), Gaps = 21/288 (7%)

Query: 8   MLLLLAAAIWGGGFVAQSSAMSSIGPFWFVGLRFAIAAIAVLPFALMETRSLKSPPRRRE 67
           +L+ L    WG  FV+    +  I P     +R  IAA+ ++ F    T+  K       
Sbjct: 9   LLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAAVILIFFIRNFTKYSKE------ 62

Query: 68  IGSFILVGLALFGGATT----QQVGLLTTTVTNSSFLTGLYVIFVPVIAVVLYRRHPHWV 123
              F+ + LA F G T+    + V L  TT TN+S +     IF  +++ ++ ++ P  +
Sbjct: 63  --DFVYIVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEKKIPSKI 120

Query: 124 VWPCALMMLGGIF-LLSGGAF--ETLTTGDILSIICAFFWAIQITLAGRFVSESGRPLAL 180
            +  +L+ L G+F L+  G F  E    GDIL       W +   +  +        +  
Sbjct: 121 KYFGSLIGLFGVFILILNGKFVLELNPLGDILMFGAVCTWVLYTFVIQKLQKHDDLKVTR 180

Query: 181 SFTQ-----FAVCSLLSCMIGVVFEPISMAAIEASMMEILYVGLVSSGLAFVLQVIGQRY 235
             T      F   +++      +FE  ++         +LY+ +  S +A++   +  R 
Sbjct: 181 DITLIGAVFFIPFTIMELGYNGMFE-FTILLNPYIAFSLLYLAIFCSAIAYLFWNMAIRL 239

Query: 236 TTAPQAAIFLSSEALFGALMASIFLKETISSAGYVGCLIIFVAILIVE 283
             A      +    +   +  +I LK   +    +G +++   + I E
Sbjct: 240 AGASTTTNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLVLFGVYISE 287



 Score = 40.0 bits (92), Expect = 7e-08
 Identities = 31/144 (21%), Positives = 65/144 (45%), Gaps = 9/144 (6%)

Query: 149 GDILSIICAFFWAIQITLAGRFVSESGRPLALSFTQFAVCSLLSCMIGVVFEPISMAAIE 208
           G +L  +   FW I   ++ + + E   P+ + F +  + +++       F   S    +
Sbjct: 7   GILLMFLTVIFWGISF-VSTKIILEFIPPITIGFIRVVIAAVILIFFIRNFTKYS----K 61

Query: 209 ASMMEILYVGLVSSGLAFVLQVIGQRYTTAPQAAIFLSSEALFGALMASIFLKETISSAG 268
              + I+  G +     ++ + +  +YTTA  A++  ++  +F  +++ I  K+  S   
Sbjct: 62  EDFVYIVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIVEKKIPSKIK 121

Query: 269 YVGCLI----IFVAILIVELVPEL 288
           Y G LI    +F+ IL  + V EL
Sbjct: 122 YFGSLIGLFGVFILILNGKFVLEL 145