Pairwise Alignments

Query, 1162 a.a., carbamoylphosphate synthase large subunit from Agrobacterium fabrum C58

Subject, 1073 a.a., Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) from Pseudomonas fluorescens FW300-N2E2

 Score = 1243 bits (3216), Expect = 0.0
 Identities = 667/1147 (58%), Positives = 813/1147 (70%), Gaps = 95/1147 (8%)

Query: 1    MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL 60
            MPKR DIKSILI+GAGPIVIGQACEFDYSG QACKAL+EEGYRVILVNSNPATIMTDP +
Sbjct: 1    MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAM 60

Query: 61   ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKP 120
            ADATY+EPI  + VAKII KERPDALLPTMGGQTALN AL L+R GVL+++ VEMIGA  
Sbjct: 61   ADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCALDLEREGVLEKFGVEMIGANA 120

Query: 121  EAIDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKTHEAARTELKAKLSGAELDK 180
            + ID AEDR+ F                                              DK
Sbjct: 121  DTIDKAEDRSRF----------------------------------------------DK 134

Query: 181  ALDNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSE 240
            A+ ++         D  +  I+H+M  A   ++ +G P IIRPSFTMGGTGGGIAYNR E
Sbjct: 135  AMKSIG-------LDCPRSGIAHSMEEANAVLERLGFPCIIRPSFTMGGTGGGIAYNREE 187

Query: 241  FFEIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS 300
            F EI   GLD SPT E+LI+ES++GWKEYEMEVVRDK DNCII+CSIEN DPMGVHTGDS
Sbjct: 188  FEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDS 247

Query: 301  ITVAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRS 360
            ITVAPA TLTDKEYQ++RNAS+AVLREIGVETGGSNVQF + P  GR+VVIEMNPRVSRS
Sbjct: 248  ITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEMNPRVSRS 307

Query: 361  SALASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF 420
            SALASKATGFPIAKVAAKLA+GYTLDEL NDITGG TPASFEPSIDYVVTK+PRFAFEKF
Sbjct: 308  SALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPRFAFEKF 367

Query: 421  PGASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLD-EIEIPGYEEGEGSKNA 479
              A   LTT MKSVGEVMAIGRTF ESLQKALRG+E G+ GLD ++++   E    S + 
Sbjct: 368  AKADARLTTQMKSVGEVMAIGRTFQESLQKALRGLEVGVCGLDPKLDLADPE----SMSV 423

Query: 480  IRAAIGTPTPDRLRMVAQAMRMGMSEEEVHENSKIDPWFIAQLKAIVDMEARIREHGLPQ 539
            ++  +  P  +R+  VA A R GM+ E++   + IDPWF+ Q++ ++  E +++  G+  
Sbjct: 424  LKRELTVPGAERIWYVADAFRAGMTVEQIFGMNMIDPWFLVQIEDLIKEEEKVKTLGMSS 483

Query: 540  -DAENLRMLKAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAYM 598
             D + +  LK  GFSD RLA L     K +   R+ L V PV+KR+DTCAAEFA+ TAY+
Sbjct: 484  IDRDTMFRLKRKGFSDMRLAKLLGVTEKSLRAHRHKLEVFPVYKRVDTCAAEFATDTAYL 543

Query: 599  YSTYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAIM 658
            YSTYE         EA  S R K++ILGGGPNRIGQGIEFDYCC HAA AL+D G+E IM
Sbjct: 544  YSTYE------EECEAAPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIM 597

Query: 659  INCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEAL 718
            +NCNPETVSTDYDTSDRLYFEP+T EDV+EI+R E+ K    GVIVQ+GGQTPLKLA AL
Sbjct: 598  VNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPK----GVIVQYGGQTPLKLARAL 653

Query: 719  EKNGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLVV 778
            E  G+PI+GT+PD ID AEDR+RFQ+++ +L+L QP N    S ++A   A++IG+PLVV
Sbjct: 654  EAAGVPIIGTSPDAIDRAEDRERFQQMVERLNLRQPPNATVRSEDEAIRAAAKIGYPLVV 713

Query: 779  RPSYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFD 838
            RPSYVLGGRAM+I++ E +L+ YL + V          +  ND           +P+L D
Sbjct: 714  RPSYVLGGRAMEIVYQEDELKRYLREAV----------QVSND-----------SPVLLD 752

Query: 839  SYLTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQT 898
             +L  A+E+DVDA+ DG++V +  IM+HIE+AG+HSGDSACSLP  SL     DE+  Q 
Sbjct: 753  HFLNCAIEMDVDAVSDGKDVVIGAIMQHIEQAGVHSGDSACSLPPYSLPAHIQDEMREQV 812

Query: 899  TALAKALKVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGEK 958
              +A  L V GLMNVQ A++   IYV+EVNPRASRTVPFV+K IG  +A IAARVMAG+ 
Sbjct: 813  KKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKT 872

Query: 959  LDAAIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALAF 1018
            L          P+       +VKEAVFPFA+FPGVD +LGPEM+STGEV+G+   F  AF
Sbjct: 873  LKELNFTKEIIPN-----FYSVKEAVFPFAKFPGVDPILGPEMKSTGEVMGVGDTFGEAF 927

Query: 1019 AKSQLGAGVDLPRSGTVFVSVRDEDKEGVLSAIRILVESGFKVLATGGTQRFLAEQGINA 1078
            AK+Q+GA   LP  GT F+SVRD+DK  V    R L+  GF+V+AT GT R +   G+  
Sbjct: 928  AKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLINLGFEVVATAGTARLIEAAGLKV 987

Query: 1079 EKINKVQEGRPHIEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAGAE 1138
             ++NKV EGRPH+ D I+N +V L+INTT+  ++I+DS S+RR  L  K+   TT+A  E
Sbjct: 988  RRVNKVTEGRPHVVDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGE 1047

Query: 1139 AAALAIK 1145
            A   A+K
Sbjct: 1048 AICEALK 1054