Pairwise Alignments

Query, 1162 a.a., carbamoylphosphate synthase large subunit from Agrobacterium fabrum C58

Subject, 1081 a.a., carbamoyl-phosphate synthase large subunit from Methanococcus maripaludis S2

 Score = 1041 bits (2691), Expect = 0.0
 Identities = 560/1166 (48%), Positives = 768/1166 (65%), Gaps = 92/1166 (7%)

Query: 3    KRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGLAD 62
            KR+DIK ++I+G+GPIVIGQA EFD+SG+QACK+LKEEG   ILVNSNPATI TD  +AD
Sbjct: 2    KREDIKKVMILGSGPIVIGQAAEFDFSGSQACKSLKEEGIYTILVNSNPATIQTDTNIAD 61

Query: 63   ATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLKRMGVLDRYNVEMIGAKPEA 122
              Y+EP+ P+++ KII KE+PDA+LPTMGGQT LN A+ L + G+L+++ VE++G+    
Sbjct: 62   KVYLEPLNPKILEKIIEKEQPDAILPTMGGQTGLNLAMELSKRGILEKHGVELLGSTESV 121

Query: 123  IDMAEDRALFREAMARIGLETPKSMLANATEIKDADRKTHEAARTELKAKLSGAELDKAL 182
            I+ +E                              DR     A  E+   ++ +      
Sbjct: 122  IETSE------------------------------DRDLFNKAMEEINQPIAKSAA---- 147

Query: 183  DNLENQWNLGETDRKQRYISHAMAIAAQAIDVVGLPAIIRPSFTMGGTGGGIAYNRSEFF 242
                                H++  A  A   +G PAI+RP+FT+GGTGGGIA N  E  
Sbjct: 148  -------------------VHSVEEAIGATKELGYPAIVRPAFTLGGTGGGIANNEEELI 188

Query: 243  EIIGGGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDSIT 302
            EI   GL  S   +VLI++S+LGWKEYE EV+RDK D CI++C++ENIDPMG+HTG+SI 
Sbjct: 189  EITKKGLKYSMIKQVLIDQSLLGWKEYEYEVMRDKNDTCIVVCNMENIDPMGIHTGESIV 248

Query: 303  VAPALTLTDKEYQMMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEMNPRVSRSSA 362
             AP+ TL+D+ +Q +R+AS+ ++R + +E GG NVQFAVNP+    VVIE+NPRVSRSSA
Sbjct: 249  TAPSQTLSDEFHQKLRDASLQIIRHLKIE-GGCNVQFAVNPEMTDYVVIEVNPRVSRSSA 307

Query: 363  LASKATGFPIAKVAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKFPG 422
            LASKATG+PIAK+AAK+AIG TLDE++ND+T   TPASFEP+IDYVV KIPR+ F+KF  
Sbjct: 308  LASKATGYPIAKIAAKIAIGRTLDEIQNDVTK-ETPASFEPTIDYVVVKIPRWPFDKFRT 366

Query: 423  ASPILTTAMKSVGEVMAIGRTFAESLQKALRGMETGLTGLDEIEIPGYEEGEGSKNAIRA 482
                L T+MKS GE+MAIGR   E+LQKA+R ++ G  G+    I   ++ E S + I  
Sbjct: 367  VDKKLGTSMKSTGEIMAIGRNLEEALQKAVRSLDIGRFGI----IADGKDKEYSNSEIVD 422

Query: 483  AIGTPTPDRLRMVAQAMRMGMSEEEVHENSKIDPWFIAQLKAIVDMEARIREHG-LPQDA 541
             +   T +RL ++A A+  G S + + E + I+P+FI ++K I+D +  +     +P D 
Sbjct: 423  ILEHATDERLFVIAYALDKGWSVDGICERTGINPFFIEKIKKIIDCKKELEVISRIPVDD 482

Query: 542  ENLRML----KAMGFSDARLASLTSKRPKEVAELRNSLNVRPVFKRIDTCAAEFASPTAY 597
            E L+ +    K++GFSD +++ + SK   E+ +LR  L V PV+K +DTCAAEF + T Y
Sbjct: 483  EKLKEILLKAKSLGFSDVQISKIFSKTENEIRDLRKRLEVIPVYKMVDTCAAEFEAKTPY 542

Query: 598  MYSTYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGFEAI 657
             YS YE  F    ++E+  SDRKKV+ILG GP RIGQG+EFDY   HA FALK+ G EAI
Sbjct: 543  YYSAYERYF-DEEQNESVSSDRKKVIILGSGPIRIGQGVEFDYSTVHAIFALKELGIEAI 601

Query: 658  MINCNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQEKGELVGVIVQFGGQTPLKLAEA 717
            ++N NPETVSTDYDTSD+LYFEPL  E+++ I+  E + G+L+GVIVQFGGQT + LA  
Sbjct: 602  IVNNNPETVSTDYDTSDKLYFEPLVYEEIMNIIENENKNGQLLGVIVQFGGQTAINLAMK 661

Query: 718  LEKNGIPILGTAPDMIDLAEDRDRFQKLLMKLDLAQPNNGIAYSVEQARLVASEIGFPLV 777
            L  +G+ ILGT+P  IDLAEDRD+F  +L KL + Q +   A+S EQA  V   IG+P +
Sbjct: 662  LYNSGVNILGTSPQSIDLAEDRDQFIHVLEKLKIPQADGATAFSEEQALKVVERIGYPAL 721

Query: 778  VRPSYVLGGRAMQIIHSEGQLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLF 837
            VRPSYVLGGRAMQI+++   L+ Y+ + V                      +   +P+L 
Sbjct: 722  VRPSYVLGGRAMQIVYNTEDLKDYMREAV---------------------KVSSDHPILI 760

Query: 838  DSYLTNAVEVDVDALCDGENVFVSGIMEHIEEAGIHSGDSACSLPSRSLSKETLDELERQ 897
            D +L  AVEVDVDA+CDGE+VF+  IMEHIEEAGIHSGDSAC +P ++LSKE ++++   
Sbjct: 761  DKFLEEAVEVDVDAVCDGESVFIGAIMEHIEEAGIHSGDSACVIPPQTLSKEVIEKIAEH 820

Query: 898  TTALAKALKVGGLMNVQYAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGE 957
            TT LA  L V GL+N+QYA+KDG +Y++E NPRASRT+P+V+K++G P+AKIA   + G+
Sbjct: 821  TTKLALELGVIGLLNIQYAVKDGVVYIIEANPRASRTIPYVSKSVGVPLAKIATNAIMGK 880

Query: 958  KLDAAIAAYGEKPDPRNLKHIAVKEAVFPFARFPGVDILLGPEMRSTGEVIGLDTDFALA 1017
            KL   +  +G        K+++VKEAVFPF + PGVD +L PEM+STGE IG+D DF  A
Sbjct: 881  KL-KEMGYFGLAKS----KYVSVKEAVFPFLKLPGVDPVLSPEMKSTGEAIGIDQDFGKA 935

Query: 1018 FAKSQLGAGVDLPRSGTVFVSVRDEDKEGVLSAIRILVESGFKVLATGGTQRFLAEQGIN 1077
            F KSQL A ++LP SGTVF+SVR+ DK+ +    +     GF+++AT GT R L    I 
Sbjct: 936  FYKSQLSANMELPTSGTVFISVRNRDKDNITKIAKKYHNLGFEIVATRGTARELRLFDIP 995

Query: 1078 AEKINKVQEGRPH-IEDAIRNRQVQLVINTTDSNKAISDSKSLRRATLMQKVPYYTTMAG 1136
              ++ K+ E   + + D ++  +V L+INT+  +KA +D   +RRA +   +P  TT+ G
Sbjct: 996  VREVRKISESMQNSVLDLMQKGEVDLIINTSSGDKAKTDGYFIRRAAVELNIPCMTTLQG 1055

Query: 1137 AEAAALAIKALKAGNLEVKPLQSYFN 1162
            A AA  AI+A+K+G L V  L    N
Sbjct: 1056 AYAAIKAIEAIKSGELGVYSLNELEN 1081